Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Srrm3Q80WV7 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC12.52□□□□□ -0.41
Srrm3Q80WV7 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Srrm3Q80WV7 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC12.52□□□□□ -0.41
Srrm3Q80WV7 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.52□□□□□ -0.41
Srrm3Q80WV7 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC12.52□□□□□ -0.41
Srrm3Q80WV7 Gm8805-201ENSMUST00000117848 313 ntBASIC12.52□□□□□ -0.41
Srrm3Q80WV7 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Srrm3Q80WV7 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.52□□□□□ -0.41
Srrm3Q80WV7 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.52□□□□□ -0.41
Srrm3Q80WV7 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Srrm3Q80WV7 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Srrm3Q80WV7 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Srrm3Q80WV7 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Srrm3Q80WV7 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Srrm3Q80WV7 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Srrm3Q80WV7 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Srrm3Q80WV7 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Srrm3Q80WV7 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Srrm3Q80WV7 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Srrm3Q80WV7 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Srrm3Q80WV7 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Srrm3Q80WV7 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Srrm3Q80WV7 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Srrm3Q80WV7 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Srrm3Q80WV7 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.52□□□□□ -0.41
Srrm3Q80WV7 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Srrm3Q80WV7 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Srrm3Q80WV7 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Srrm3Q80WV7 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Srrm3Q80WV7 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Srrm3Q80WV7 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Srrm3Q80WV7 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Srrm3Q80WV7 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Srrm3Q80WV7 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Srrm3Q80WV7 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Srrm3Q80WV7 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Srrm3Q80WV7 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Srrm3Q80WV7 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Srrm3Q80WV7 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC12.51□□□□□ -0.41
Srrm3Q80WV7 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Srrm3Q80WV7 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Srrm3Q80WV7 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Srrm3Q80WV7 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Srrm3Q80WV7 Gm15370-201ENSMUST00000117158 253 ntBASIC12.51□□□□□ -0.41
Srrm3Q80WV7 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.51□□□□□ -0.41
Srrm3Q80WV7 Gm23119-201ENSMUST00000158610 140 ntBASIC12.51□□□□□ -0.41
Srrm3Q80WV7 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Srrm3Q80WV7 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Srrm3Q80WV7 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.51□□□□□ -0.41
Srrm3Q80WV7 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC12.51□□□□□ -0.41
Srrm3Q80WV7 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.51□□□□□ -0.41
Srrm3Q80WV7 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Srrm3Q80WV7 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.51□□□□□ -0.41
Srrm3Q80WV7 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Srrm3Q80WV7 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Srrm3Q80WV7 Gm10268-201ENSMUST00000085340 555 ntBASIC12.51□□□□□ -0.41
Srrm3Q80WV7 Gm42141-201ENSMUST00000196534 2172 ntBASIC12.51□□□□□ -0.41
Srrm3Q80WV7 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Srrm3Q80WV7 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Srrm3Q80WV7 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Srrm3Q80WV7 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.51□□□□□ -0.41
Srrm3Q80WV7 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Srrm3Q80WV7 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Srrm3Q80WV7 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Srrm3Q80WV7 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Srrm3Q80WV7 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Srrm3Q80WV7 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Srrm3Q80WV7 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.51□□□□□ -0.41
Srrm3Q80WV7 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Srrm3Q80WV7 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Srrm3Q80WV7 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC12.51□□□□□ -0.41
Srrm3Q80WV7 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Srrm3Q80WV7 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC12.51□□□□□ -0.41
Srrm3Q80WV7 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Srrm3Q80WV7 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.51□□□□□ -0.41
Srrm3Q80WV7 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Srrm3Q80WV7 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Srrm3Q80WV7 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Srrm3Q80WV7 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Srrm3Q80WV7 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC12.51□□□□□ -0.41
Srrm3Q80WV7 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Srrm3Q80WV7 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Srrm3Q80WV7 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Srrm3Q80WV7 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Srrm3Q80WV7 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Srrm3Q80WV7 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Srrm3Q80WV7 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Srrm3Q80WV7 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Srrm3Q80WV7 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Srrm3Q80WV7 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Srrm3Q80WV7 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
Srrm3Q80WV7 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Srrm3Q80WV7 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Srrm3Q80WV7 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Srrm3Q80WV7 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Srrm3Q80WV7 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Srrm3Q80WV7 AC154314.2-201ENSMUST00000223677 3502 ntBASIC12.5□□□□□ -0.41
Srrm3Q80WV7 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Srrm3Q80WV7 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms