Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.65□□□□□ -0.38
Prpf38bQ80SY5 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.65□□□□□ -0.38
Prpf38bQ80SY5 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.65□□□□□ -0.38
Prpf38bQ80SY5 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Prpf38bQ80SY5 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Prpf38bQ80SY5 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Prpf38bQ80SY5 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Prpf38bQ80SY5 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.65□□□□□ -0.38
Prpf38bQ80SY5 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Prpf38bQ80SY5 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Prpf38bQ80SY5 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.65□□□□□ -0.38
Prpf38bQ80SY5 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Prpf38bQ80SY5 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Prpf38bQ80SY5 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Prpf38bQ80SY5 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Prpf38bQ80SY5 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Prpf38bQ80SY5 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.65□□□□□ -0.39
Prpf38bQ80SY5 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Prpf38bQ80SY5 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.64□□□□□ -0.39
Prpf38bQ80SY5 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Prpf38bQ80SY5 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Prpf38bQ80SY5 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Prpf38bQ80SY5 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Prpf38bQ80SY5 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Prpf38bQ80SY5 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Prpf38bQ80SY5 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Prpf38bQ80SY5 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Prpf38bQ80SY5 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Prpf38bQ80SY5 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Prpf38bQ80SY5 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Prpf38bQ80SY5 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.64□□□□□ -0.39
Prpf38bQ80SY5 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Prpf38bQ80SY5 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC12.64□□□□□ -0.39
Prpf38bQ80SY5 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Prpf38bQ80SY5 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.64□□□□□ -0.39
Prpf38bQ80SY5 Gm19091-201ENSMUST00000208120 978 ntBASIC12.64□□□□□ -0.39
Prpf38bQ80SY5 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Prpf38bQ80SY5 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Prpf38bQ80SY5 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Prpf38bQ80SY5 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Prpf38bQ80SY5 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.64□□□□□ -0.39
Prpf38bQ80SY5 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Prpf38bQ80SY5 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Prpf38bQ80SY5 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Prpf38bQ80SY5 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Prpf38bQ80SY5 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Prpf38bQ80SY5 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Prpf38bQ80SY5 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Prpf38bQ80SY5 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.64□□□□□ -0.39
Prpf38bQ80SY5 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Prpf38bQ80SY5 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Prpf38bQ80SY5 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.64□□□□□ -0.39
Prpf38bQ80SY5 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Prpf38bQ80SY5 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.63□□□□□ -0.39
Prpf38bQ80SY5 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC12.63□□□□□ -0.39
Prpf38bQ80SY5 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Prpf38bQ80SY5 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Prpf38bQ80SY5 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Prpf38bQ80SY5 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Prpf38bQ80SY5 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Prpf38bQ80SY5 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Prpf38bQ80SY5 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Prpf38bQ80SY5 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Prpf38bQ80SY5 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Prpf38bQ80SY5 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Prpf38bQ80SY5 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Prpf38bQ80SY5 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Prpf38bQ80SY5 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC12.63□□□□□ -0.39
Prpf38bQ80SY5 Gm15515-201ENSMUST00000117827 822 ntBASIC12.63□□□□□ -0.39
Prpf38bQ80SY5 Gm15711-201ENSMUST00000118889 535 ntBASIC12.63□□□□□ -0.39
Prpf38bQ80SY5 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Prpf38bQ80SY5 Gm23363-201ENSMUST00000175024 79 ntBASIC12.63□□□□□ -0.39
Prpf38bQ80SY5 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC12.63□□□□□ -0.39
Prpf38bQ80SY5 Gm42779-201ENSMUST00000198807 406 ntBASIC12.63□□□□□ -0.39
Prpf38bQ80SY5 Gm5298-201ENSMUST00000201122 892 ntBASIC12.63□□□□□ -0.39
Prpf38bQ80SY5 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.63□□□□□ -0.39
Prpf38bQ80SY5 Gm18974-201ENSMUST00000221478 1031 ntBASIC12.63□□□□□ -0.39
Prpf38bQ80SY5 Gm1821-202ENSMUST00000227415 750 ntBASIC12.63□□□□□ -0.39
Prpf38bQ80SY5 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Prpf38bQ80SY5 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Prpf38bQ80SY5 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Prpf38bQ80SY5 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Prpf38bQ80SY5 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Prpf38bQ80SY5 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Prpf38bQ80SY5 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.63□□□□□ -0.39
Prpf38bQ80SY5 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Prpf38bQ80SY5 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Prpf38bQ80SY5 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Prpf38bQ80SY5 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.63□□□□□ -0.39
Prpf38bQ80SY5 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Prpf38bQ80SY5 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Prpf38bQ80SY5 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.63□□□□□ -0.39
Prpf38bQ80SY5 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Prpf38bQ80SY5 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Prpf38bQ80SY5 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Prpf38bQ80SY5 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Prpf38bQ80SY5 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Prpf38bQ80SY5 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms