Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pif1Q80SX8 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pif1Q80SX8 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pif1Q80SX8 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.18□□□□□ -0.62
Pif1Q80SX8 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pif1Q80SX8 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pif1Q80SX8 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pif1Q80SX8 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pif1Q80SX8 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pif1Q80SX8 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pif1Q80SX8 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.17□□□□□ -0.62
Pif1Q80SX8 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.17□□□□□ -0.62
Pif1Q80SX8 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pif1Q80SX8 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pif1Q80SX8 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pif1Q80SX8 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pif1Q80SX8 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.17□□□□□ -0.62
Pif1Q80SX8 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Pif1Q80SX8 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pif1Q80SX8 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Pif1Q80SX8 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pif1Q80SX8 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.17□□□□□ -0.62
Pif1Q80SX8 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.17□□□□□ -0.62
Pif1Q80SX8 Gm24891-201ENSMUST00000104391 136 ntBASIC11.17□□□□□ -0.62
Pif1Q80SX8 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pif1Q80SX8 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Pif1Q80SX8 Gm13888-201ENSMUST00000119148 422 ntBASIC11.17□□□□□ -0.62
Pif1Q80SX8 Gm14760-201ENSMUST00000121831 999 ntBASIC11.17□□□□□ -0.62
Pif1Q80SX8 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Pif1Q80SX8 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.17□□□□□ -0.62
Pif1Q80SX8 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.17□□□□□ -0.62
Pif1Q80SX8 Gm3332-201ENSMUST00000189337 928 ntBASIC11.17□□□□□ -0.62
Pif1Q80SX8 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.17□□□□□ -0.62
Pif1Q80SX8 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Pif1Q80SX8 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.17□□□□□ -0.62
Pif1Q80SX8 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.17□□□□□ -0.62
Pif1Q80SX8 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC11.17□□□□□ -0.62
Pif1Q80SX8 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.17□□□□□ -0.62
Pif1Q80SX8 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.17□□□□□ -0.62
Pif1Q80SX8 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pif1Q80SX8 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pif1Q80SX8 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Pif1Q80SX8 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pif1Q80SX8 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pif1Q80SX8 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pif1Q80SX8 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.17□□□□□ -0.62
Pif1Q80SX8 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pif1Q80SX8 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pif1Q80SX8 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
Pif1Q80SX8 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
Pif1Q80SX8 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pif1Q80SX8 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pif1Q80SX8 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.17□□□□□ -0.62
Pif1Q80SX8 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pif1Q80SX8 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pif1Q80SX8 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pif1Q80SX8 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pif1Q80SX8 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Pif1Q80SX8 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pif1Q80SX8 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pif1Q80SX8 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Pif1Q80SX8 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pif1Q80SX8 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pif1Q80SX8 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Pif1Q80SX8 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pif1Q80SX8 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pif1Q80SX8 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pif1Q80SX8 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pif1Q80SX8 Gm4454-201ENSMUST00000190585 2578 ntBASIC11.16□□□□□ -0.62
Pif1Q80SX8 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC11.16□□□□□ -0.62
Pif1Q80SX8 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pif1Q80SX8 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pif1Q80SX8 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Pif1Q80SX8 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Pif1Q80SX8 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
Pif1Q80SX8 Gm11667-201ENSMUST00000119828 486 ntBASIC11.16□□□□□ -0.62
Pif1Q80SX8 Gm12029-201ENSMUST00000120073 832 ntBASIC11.16□□□□□ -0.62
Pif1Q80SX8 Gm13438-201ENSMUST00000120100 573 ntBASIC11.16□□□□□ -0.62
Pif1Q80SX8 Gm13899-201ENSMUST00000121519 1255 ntBASIC11.16□□□□□ -0.62
Pif1Q80SX8 Gm12208-201ENSMUST00000122004 163 ntBASIC11.16□□□□□ -0.62
Pif1Q80SX8 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.16□□□□□ -0.62
Pif1Q80SX8 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pif1Q80SX8 Gm23085-201ENSMUST00000157849 293 ntBASIC11.16□□□□□ -0.62
Pif1Q80SX8 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Pif1Q80SX8 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.16□□□□□ -0.62
Pif1Q80SX8 Gm9630-201ENSMUST00000178304 885 ntBASIC11.16□□□□□ -0.62
Pif1Q80SX8 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Pif1Q80SX8 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC11.16□□□□□ -0.62
Pif1Q80SX8 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pif1Q80SX8 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Pif1Q80SX8 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
Pif1Q80SX8 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
Pif1Q80SX8 Gm44551-201ENSMUST00000208804 171 ntBASIC11.16□□□□□ -0.62
Pif1Q80SX8 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.16□□□□□ -0.62
Pif1Q80SX8 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pif1Q80SX8 AC166992.1-201ENSMUST00000216356 565 ntBASIC11.16□□□□□ -0.62
Pif1Q80SX8 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pif1Q80SX8 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.16□□□□□ -0.62
Pif1Q80SX8 Grb2-204ENSMUST00000106499 2333 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pif1Q80SX8 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms