Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.06□□□□□ -0.32
Ctdp1Q7TSG2 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ctdp1Q7TSG2 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ctdp1Q7TSG2 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ctdp1Q7TSG2 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ctdp1Q7TSG2 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ctdp1Q7TSG2 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ctdp1Q7TSG2 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ctdp1Q7TSG2 Gm42498-201ENSMUST00000199981 1372 ntBASIC13.06□□□□□ -0.32
Ctdp1Q7TSG2 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ctdp1Q7TSG2 AC108858.2-201ENSMUST00000228186 1425 ntBASIC13.05□□□□□ -0.32
Ctdp1Q7TSG2 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ctdp1Q7TSG2 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Ctdp1Q7TSG2 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Ctdp1Q7TSG2 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ctdp1Q7TSG2 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ctdp1Q7TSG2 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ctdp1Q7TSG2 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ctdp1Q7TSG2 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ctdp1Q7TSG2 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ctdp1Q7TSG2 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ctdp1Q7TSG2 AC093022.4-203ENSMUST00000228523 2657 ntBASIC13.05□□□□□ -0.32
Ctdp1Q7TSG2 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.05□□□□□ -0.32
Ctdp1Q7TSG2 Gm5940-201ENSMUST00000117582 1068 ntBASIC13.05□□□□□ -0.32
Ctdp1Q7TSG2 Gm11591-201ENSMUST00000120063 702 ntBASIC13.05□□□□□ -0.32
Ctdp1Q7TSG2 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.05□□□□□ -0.32
Ctdp1Q7TSG2 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ctdp1Q7TSG2 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13.05□□□□□ -0.32
Ctdp1Q7TSG2 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.05□□□□□ -0.32
Ctdp1Q7TSG2 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ctdp1Q7TSG2 Gm18584-201ENSMUST00000203098 964 ntBASIC13.05□□□□□ -0.32
Ctdp1Q7TSG2 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC13.05□□□□□ -0.32
Ctdp1Q7TSG2 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.05□□□□□ -0.32
Ctdp1Q7TSG2 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.05□□□□□ -0.32
Ctdp1Q7TSG2 AC154319.1-201ENSMUST00000216330 312 ntBASIC13.05□□□□□ -0.32
Ctdp1Q7TSG2 AL589735.1-201ENSMUST00000224353 270 ntBASIC13.05□□□□□ -0.32
Ctdp1Q7TSG2 Gm7399-201ENSMUST00000032395 858 ntBASIC13.05□□□□□ -0.32
Ctdp1Q7TSG2 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Ctdp1Q7TSG2 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ctdp1Q7TSG2 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ctdp1Q7TSG2 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Ctdp1Q7TSG2 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ctdp1Q7TSG2 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ctdp1Q7TSG2 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ctdp1Q7TSG2 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC13.05□□□□□ -0.32
Ctdp1Q7TSG2 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ctdp1Q7TSG2 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Ctdp1Q7TSG2 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ctdp1Q7TSG2 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC13.04□□□□□ -0.32
Ctdp1Q7TSG2 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ctdp1Q7TSG2 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ctdp1Q7TSG2 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ctdp1Q7TSG2 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ctdp1Q7TSG2 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Ctdp1Q7TSG2 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Ctdp1Q7TSG2 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ctdp1Q7TSG2 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ctdp1Q7TSG2 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ctdp1Q7TSG2 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Ctdp1Q7TSG2 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ctdp1Q7TSG2 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Ctdp1Q7TSG2 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ctdp1Q7TSG2 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ctdp1Q7TSG2 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ctdp1Q7TSG2 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ctdp1Q7TSG2 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.04□□□□□ -0.32
Ctdp1Q7TSG2 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ctdp1Q7TSG2 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ctdp1Q7TSG2 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.04□□□□□ -0.32
Ctdp1Q7TSG2 Gm8018-201ENSMUST00000173536 789 ntBASIC13.04□□□□□ -0.32
Ctdp1Q7TSG2 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.04□□□□□ -0.32
Ctdp1Q7TSG2 Gm43133-201ENSMUST00000197472 463 ntBASIC13.04□□□□□ -0.32
Ctdp1Q7TSG2 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.04□□□□□ -0.32
Ctdp1Q7TSG2 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC13.04□□□□□ -0.32
Ctdp1Q7TSG2 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ctdp1Q7TSG2 Gm5781-201ENSMUST00000219792 443 ntBASIC13.04□□□□□ -0.32
Ctdp1Q7TSG2 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.04□□□□□ -0.32
Ctdp1Q7TSG2 AC154171.1-201ENSMUST00000224610 643 ntBASIC13.04□□□□□ -0.32
Ctdp1Q7TSG2 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Ctdp1Q7TSG2 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ctdp1Q7TSG2 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ctdp1Q7TSG2 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ctdp1Q7TSG2 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ctdp1Q7TSG2 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ctdp1Q7TSG2 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ctdp1Q7TSG2 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC13.04□□□□□ -0.32
Ctdp1Q7TSG2 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ctdp1Q7TSG2 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Ctdp1Q7TSG2 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ctdp1Q7TSG2 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Ctdp1Q7TSG2 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC13.04□□□□□ -0.32
Ctdp1Q7TSG2 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ctdp1Q7TSG2 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ctdp1Q7TSG2 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ctdp1Q7TSG2 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ctdp1Q7TSG2 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ctdp1Q7TSG2 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ctdp1Q7TSG2 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ctdp1Q7TSG2 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ctdp1Q7TSG2 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms