Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC9.73□□□□□ -0.85
Vma21Q78T54 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
Vma21Q78T54 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Vma21Q78T54 Gm44711-201ENSMUST00000205414 1264 ntBASIC9.73□□□□□ -0.85
Vma21Q78T54 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Vma21Q78T54 AC166095.1-201ENSMUST00000223731 1241 ntBASIC9.73□□□□□ -0.85
Vma21Q78T54 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vma21Q78T54 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vma21Q78T54 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vma21Q78T54 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vma21Q78T54 Snora73a-201ENSMUST00000082453 205 ntBASIC9.73□□□□□ -0.85
Vma21Q78T54 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vma21Q78T54 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Vma21Q78T54 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Vma21Q78T54 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Vma21Q78T54 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vma21Q78T54 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vma21Q78T54 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vma21Q78T54 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC9.73□□□□□ -0.85
Vma21Q78T54 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vma21Q78T54 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vma21Q78T54 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vma21Q78T54 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Vma21Q78T54 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC9.73□□□□□ -0.85
Vma21Q78T54 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC9.73□□□□□ -0.85
Vma21Q78T54 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC9.73□□□□□ -0.85
Vma21Q78T54 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vma21Q78T54 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vma21Q78T54 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Vma21Q78T54 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC9.73□□□□□ -0.85
Vma21Q78T54 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC9.73□□□□□ -0.85
Vma21Q78T54 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vma21Q78T54 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vma21Q78T54 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC9.73□□□□□ -0.85
Vma21Q78T54 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vma21Q78T54 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC9.73□□□□□ -0.85
Vma21Q78T54 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Vma21Q78T54 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Vma21Q78T54 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Vma21Q78T54 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC9.72□□□□□ -0.85
Vma21Q78T54 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Vma21Q78T54 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Vma21Q78T54 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Vma21Q78T54 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Vma21Q78T54 AC093022.4-203ENSMUST00000228523 2657 ntBASIC9.72□□□□□ -0.85
Vma21Q78T54 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Vma21Q78T54 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Vma21Q78T54 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Vma21Q78T54 AC154671.1-201ENSMUST00000228617 1578 ntBASIC9.72□□□□□ -0.85
Vma21Q78T54 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Vma21Q78T54 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Vma21Q78T54 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Vma21Q78T54 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Vma21Q78T54 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Vma21Q78T54 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Vma21Q78T54 Gm6189-201ENSMUST00000164487 2082 ntBASIC9.72□□□□□ -0.85
Vma21Q78T54 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Vma21Q78T54 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Vma21Q78T54 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Vma21Q78T54 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Vma21Q78T54 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC9.72□□□□□ -0.85
Vma21Q78T54 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Vma21Q78T54 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC9.72□□□□□ -0.85
Vma21Q78T54 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC9.72□□□□□ -0.85
Vma21Q78T54 Gm25261-201ENSMUST00000157416 134 ntBASIC9.72□□□□□ -0.85
Vma21Q78T54 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Vma21Q78T54 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Vma21Q78T54 Gm8602-201ENSMUST00000184045 607 ntBASIC9.72□□□□□ -0.85
Vma21Q78T54 Gm27731-201ENSMUST00000185192 107 ntBASIC9.72□□□□□ -0.85
Vma21Q78T54 Gm28882-201ENSMUST00000185504 314 ntBASIC9.72□□□□□ -0.85
Vma21Q78T54 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Vma21Q78T54 Gm7619-201ENSMUST00000210649 1282 ntBASIC9.72□□□□□ -0.85
Vma21Q78T54 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC9.72□□□□□ -0.85
Vma21Q78T54 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC9.72□□□□□ -0.85
Vma21Q78T54 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Vma21Q78T54 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Vma21Q78T54 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Vma21Q78T54 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Vma21Q78T54 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC9.72□□□□□ -0.85
Vma21Q78T54 Gm43760-201ENSMUST00000202120 3015 ntBASIC9.72□□□□□ -0.85
Vma21Q78T54 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Vma21Q78T54 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Vma21Q78T54 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Vma21Q78T54 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Vma21Q78T54 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Vma21Q78T54 AC114008.2-201ENSMUST00000227699 1347 ntBASIC9.72□□□□□ -0.85
Vma21Q78T54 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Vma21Q78T54 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC9.72□□□□□ -0.85
Vma21Q78T54 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Vma21Q78T54 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Vma21Q78T54 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Vma21Q78T54 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Vma21Q78T54 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Vma21Q78T54 Gm13127-201ENSMUST00000118978 1389 ntBASIC9.72□□□□□ -0.85
Vma21Q78T54 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Vma21Q78T54 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Vma21Q78T54 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Vma21Q78T54 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Vma21Q78T54 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Vma21Q78T54 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms