Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CtifQ6PEE2 Gm44855-201ENSMUST00000205725 362 ntBASIC12.75□□□□□ -0.37
CtifQ6PEE2 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CtifQ6PEE2 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.75□□□□□ -0.37
CtifQ6PEE2 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.75□□□□□ -0.37
CtifQ6PEE2 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC12.75□□□□□ -0.37
CtifQ6PEE2 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CtifQ6PEE2 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CtifQ6PEE2 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CtifQ6PEE2 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
CtifQ6PEE2 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CtifQ6PEE2 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
CtifQ6PEE2 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CtifQ6PEE2 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CtifQ6PEE2 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CtifQ6PEE2 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
CtifQ6PEE2 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CtifQ6PEE2 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CtifQ6PEE2 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CtifQ6PEE2 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CtifQ6PEE2 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
CtifQ6PEE2 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CtifQ6PEE2 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CtifQ6PEE2 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CtifQ6PEE2 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CtifQ6PEE2 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CtifQ6PEE2 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CtifQ6PEE2 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
CtifQ6PEE2 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
CtifQ6PEE2 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
CtifQ6PEE2 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CtifQ6PEE2 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC12.74□□□□□ -0.37
CtifQ6PEE2 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CtifQ6PEE2 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CtifQ6PEE2 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CtifQ6PEE2 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CtifQ6PEE2 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CtifQ6PEE2 AC154537.1-201ENSMUST00000226101 1304 ntBASIC12.74□□□□□ -0.37
CtifQ6PEE2 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CtifQ6PEE2 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CtifQ6PEE2 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.74□□□□□ -0.37
CtifQ6PEE2 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CtifQ6PEE2 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CtifQ6PEE2 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CtifQ6PEE2 Gm27331-201ENSMUST00000183705 60 ntBASIC12.74□□□□□ -0.37
CtifQ6PEE2 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.74□□□□□ -0.37
CtifQ6PEE2 Lect2-202ENSMUST00000225183 823 ntBASIC12.74□□□□□ -0.37
CtifQ6PEE2 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.74□□□□□ -0.37
CtifQ6PEE2 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CtifQ6PEE2 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CtifQ6PEE2 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.74□□□□□ -0.37
CtifQ6PEE2 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CtifQ6PEE2 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CtifQ6PEE2 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CtifQ6PEE2 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CtifQ6PEE2 CT009713.5-203ENSMUST00000224218 2079 ntBASIC12.74□□□□□ -0.37
CtifQ6PEE2 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CtifQ6PEE2 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CtifQ6PEE2 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CtifQ6PEE2 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
CtifQ6PEE2 Gm18798-201ENSMUST00000187264 1700 ntBASIC12.74□□□□□ -0.37
CtifQ6PEE2 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC12.74□□□□□ -0.37
CtifQ6PEE2 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CtifQ6PEE2 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CtifQ6PEE2 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CtifQ6PEE2 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CtifQ6PEE2 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CtifQ6PEE2 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CtifQ6PEE2 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
CtifQ6PEE2 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CtifQ6PEE2 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CtifQ6PEE2 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CtifQ6PEE2 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
CtifQ6PEE2 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CtifQ6PEE2 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CtifQ6PEE2 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CtifQ6PEE2 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CtifQ6PEE2 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CtifQ6PEE2 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CtifQ6PEE2 Gm24830-201ENSMUST00000102024 166 ntBASIC12.73□□□□□ -0.37
CtifQ6PEE2 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
CtifQ6PEE2 Gm15371-201ENSMUST00000117057 784 ntBASIC12.73□□□□□ -0.37
CtifQ6PEE2 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CtifQ6PEE2 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.73□□□□□ -0.37
CtifQ6PEE2 Gm11597-201ENSMUST00000121423 964 ntBASIC12.73□□□□□ -0.37
CtifQ6PEE2 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.73□□□□□ -0.37
CtifQ6PEE2 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CtifQ6PEE2 Mir1938-201ENSMUST00000158746 100 ntBASIC12.73□□□□□ -0.37
CtifQ6PEE2 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.73□□□□□ -0.37
CtifQ6PEE2 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CtifQ6PEE2 Gm38294-201ENSMUST00000192831 381 ntBASIC12.73□□□□□ -0.37
CtifQ6PEE2 Gm38092-201ENSMUST00000195600 653 ntBASIC12.73□□□□□ -0.37
CtifQ6PEE2 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
CtifQ6PEE2 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CtifQ6PEE2 Gm6888-201ENSMUST00000221983 706 ntBASIC12.73□□□□□ -0.37
CtifQ6PEE2 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.73□□□□□ -0.37
CtifQ6PEE2 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.73□□□□□ -0.37
CtifQ6PEE2 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CtifQ6PEE2 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CtifQ6PEE2 Gm26232-201ENSMUST00000083360 166 ntBASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms