Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Smarcd3Q6P9Z1 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC10.98□□□□□ -0.65
Smarcd3Q6P9Z1 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC10.98□□□□□ -0.65
Smarcd3Q6P9Z1 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
Smarcd3Q6P9Z1 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC10.98□□□□□ -0.65
Smarcd3Q6P9Z1 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC10.98□□□□□ -0.65
Smarcd3Q6P9Z1 Gm27731-201ENSMUST00000185192 107 ntBASIC10.98□□□□□ -0.65
Smarcd3Q6P9Z1 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC10.98□□□□□ -0.65
Smarcd3Q6P9Z1 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC10.98□□□□□ -0.65
Smarcd3Q6P9Z1 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Smarcd3Q6P9Z1 Gm18782-201ENSMUST00000209023 1399 ntBASIC10.98□□□□□ -0.65
Smarcd3Q6P9Z1 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Smarcd3Q6P9Z1 AC108858.2-201ENSMUST00000228186 1425 ntBASIC10.98□□□□□ -0.65
Smarcd3Q6P9Z1 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Smarcd3Q6P9Z1 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
Smarcd3Q6P9Z1 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Smarcd3Q6P9Z1 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Smarcd3Q6P9Z1 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
Smarcd3Q6P9Z1 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Smarcd3Q6P9Z1 Rgr-203ENSMUST00000225070 4704 ntBASIC10.98□□□□□ -0.65
Smarcd3Q6P9Z1 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Smarcd3Q6P9Z1 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Smarcd3Q6P9Z1 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC10.98□□□□□ -0.65
Smarcd3Q6P9Z1 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC10.98□□□□□ -0.65
Smarcd3Q6P9Z1 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Smarcd3Q6P9Z1 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC10.98□□□□□ -0.65
Smarcd3Q6P9Z1 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Smarcd3Q6P9Z1 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Smarcd3Q6P9Z1 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Smarcd3Q6P9Z1 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Smarcd3Q6P9Z1 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.98□□□□□ -0.65
Smarcd3Q6P9Z1 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smarcd3Q6P9Z1 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smarcd3Q6P9Z1 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smarcd3Q6P9Z1 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smarcd3Q6P9Z1 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smarcd3Q6P9Z1 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smarcd3Q6P9Z1 Gm13226-201ENSMUST00000117838 404 ntBASIC10.97□□□□□ -0.65
Smarcd3Q6P9Z1 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC10.97□□□□□ -0.65
Smarcd3Q6P9Z1 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Smarcd3Q6P9Z1 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC10.97□□□□□ -0.65
Smarcd3Q6P9Z1 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Smarcd3Q6P9Z1 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC10.97□□□□□ -0.65
Smarcd3Q6P9Z1 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smarcd3Q6P9Z1 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smarcd3Q6P9Z1 AC166095.1-201ENSMUST00000223731 1241 ntBASIC10.97□□□□□ -0.65
Smarcd3Q6P9Z1 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smarcd3Q6P9Z1 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Smarcd3Q6P9Z1 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smarcd3Q6P9Z1 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smarcd3Q6P9Z1 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smarcd3Q6P9Z1 Gm2673-201ENSMUST00000120958 1608 ntBASIC10.97□□□□□ -0.65
Smarcd3Q6P9Z1 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC10.97□□□□□ -0.65
Smarcd3Q6P9Z1 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Smarcd3Q6P9Z1 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smarcd3Q6P9Z1 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC10.97□□□□□ -0.65
Smarcd3Q6P9Z1 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Smarcd3Q6P9Z1 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smarcd3Q6P9Z1 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smarcd3Q6P9Z1 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smarcd3Q6P9Z1 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smarcd3Q6P9Z1 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smarcd3Q6P9Z1 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smarcd3Q6P9Z1 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smarcd3Q6P9Z1 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Smarcd3Q6P9Z1 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smarcd3Q6P9Z1 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Smarcd3Q6P9Z1 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smarcd3Q6P9Z1 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Smarcd3Q6P9Z1 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC10.96□□□□□ -0.65
Smarcd3Q6P9Z1 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smarcd3Q6P9Z1 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smarcd3Q6P9Z1 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smarcd3Q6P9Z1 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC10.96□□□□□ -0.65
Smarcd3Q6P9Z1 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC10.96□□□□□ -0.65
Smarcd3Q6P9Z1 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.96□□□□□ -0.65
Smarcd3Q6P9Z1 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smarcd3Q6P9Z1 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Smarcd3Q6P9Z1 Gm37737-201ENSMUST00000195013 1638 ntBASIC10.96□□□□□ -0.65
Smarcd3Q6P9Z1 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Smarcd3Q6P9Z1 Gm45776-201ENSMUST00000212366 1522 ntBASIC10.96□□□□□ -0.65
Smarcd3Q6P9Z1 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smarcd3Q6P9Z1 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smarcd3Q6P9Z1 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Smarcd3Q6P9Z1 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.96□□□□□ -0.65
Smarcd3Q6P9Z1 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smarcd3Q6P9Z1 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smarcd3Q6P9Z1 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Smarcd3Q6P9Z1 Gm11425-201ENSMUST00000119608 498 ntBASIC10.96□□□□□ -0.65
Smarcd3Q6P9Z1 Gm8908-201ENSMUST00000121633 1024 ntBASIC10.96□□□□□ -0.65
Smarcd3Q6P9Z1 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Smarcd3Q6P9Z1 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smarcd3Q6P9Z1 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smarcd3Q6P9Z1 Mir1982-201ENSMUST00000157368 74 ntBASIC10.96□□□□□ -0.65
Smarcd3Q6P9Z1 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC10.96□□□□□ -0.65
Smarcd3Q6P9Z1 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Smarcd3Q6P9Z1 Gm45784-201ENSMUST00000188360 142 ntBASIC10.96□□□□□ -0.65
Smarcd3Q6P9Z1 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC10.96□□□□□ -0.65
Smarcd3Q6P9Z1 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC10.96□□□□□ -0.65
Smarcd3Q6P9Z1 AC153962.4-201ENSMUST00000217878 242 ntBASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms