Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Casc4Q6P2L7 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Casc4Q6P2L7 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Casc4Q6P2L7 AC123738.2-201ENSMUST00000223791 1899 ntBASIC12.16□□□□□ -0.46
Casc4Q6P2L7 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Casc4Q6P2L7 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Casc4Q6P2L7 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Casc4Q6P2L7 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Casc4Q6P2L7 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.16□□□□□ -0.46
Casc4Q6P2L7 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Casc4Q6P2L7 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Casc4Q6P2L7 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Casc4Q6P2L7 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Casc4Q6P2L7 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Casc4Q6P2L7 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Casc4Q6P2L7 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Casc4Q6P2L7 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Casc4Q6P2L7 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.15□□□□□ -0.46
Casc4Q6P2L7 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Casc4Q6P2L7 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Casc4Q6P2L7 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.15□□□□□ -0.46
Casc4Q6P2L7 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.15□□□□□ -0.46
Casc4Q6P2L7 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Casc4Q6P2L7 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Casc4Q6P2L7 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Casc4Q6P2L7 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Casc4Q6P2L7 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Casc4Q6P2L7 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Casc4Q6P2L7 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.15□□□□□ -0.46
Casc4Q6P2L7 Gm14130-201ENSMUST00000118417 987 ntBASIC12.15□□□□□ -0.46
Casc4Q6P2L7 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.15□□□□□ -0.46
Casc4Q6P2L7 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Casc4Q6P2L7 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Casc4Q6P2L7 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.15□□□□□ -0.46
Casc4Q6P2L7 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.15□□□□□ -0.46
Casc4Q6P2L7 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.15□□□□□ -0.46
Casc4Q6P2L7 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Casc4Q6P2L7 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.15□□□□□ -0.46
Casc4Q6P2L7 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Casc4Q6P2L7 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Casc4Q6P2L7 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Casc4Q6P2L7 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Casc4Q6P2L7 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Casc4Q6P2L7 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Casc4Q6P2L7 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Casc4Q6P2L7 Paupar-201ENSMUST00000194826 3482 ntBASIC12.15□□□□□ -0.46
Casc4Q6P2L7 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Casc4Q6P2L7 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Casc4Q6P2L7 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Casc4Q6P2L7 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Casc4Q6P2L7 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Casc4Q6P2L7 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Casc4Q6P2L7 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Casc4Q6P2L7 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.14□□□□□ -0.47
Casc4Q6P2L7 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Casc4Q6P2L7 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Casc4Q6P2L7 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Casc4Q6P2L7 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.14□□□□□ -0.47
Casc4Q6P2L7 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Casc4Q6P2L7 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Casc4Q6P2L7 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Casc4Q6P2L7 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Casc4Q6P2L7 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Casc4Q6P2L7 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Casc4Q6P2L7 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Casc4Q6P2L7 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Casc4Q6P2L7 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.14□□□□□ -0.47
Casc4Q6P2L7 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.14□□□□□ -0.47
Casc4Q6P2L7 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.14□□□□□ -0.47
Casc4Q6P2L7 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.14□□□□□ -0.47
Casc4Q6P2L7 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Casc4Q6P2L7 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Casc4Q6P2L7 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Casc4Q6P2L7 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Casc4Q6P2L7 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Casc4Q6P2L7 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Casc4Q6P2L7 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Casc4Q6P2L7 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Casc4Q6P2L7 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Casc4Q6P2L7 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Casc4Q6P2L7 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.14□□□□□ -0.47
Casc4Q6P2L7 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Casc4Q6P2L7 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Casc4Q6P2L7 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Casc4Q6P2L7 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Casc4Q6P2L7 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Casc4Q6P2L7 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.13□□□□□ -0.47
Casc4Q6P2L7 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.13□□□□□ -0.47
Casc4Q6P2L7 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms