Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
ParpbpQ6IRT3 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
ParpbpQ6IRT3 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
ParpbpQ6IRT3 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
ParpbpQ6IRT3 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
ParpbpQ6IRT3 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
ParpbpQ6IRT3 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
ParpbpQ6IRT3 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.27□□□□□ -0.61
ParpbpQ6IRT3 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
ParpbpQ6IRT3 Gm14109-201ENSMUST00000118814 309 ntBASIC11.27□□□□□ -0.61
ParpbpQ6IRT3 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.27□□□□□ -0.61
ParpbpQ6IRT3 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.27□□□□□ -0.61
ParpbpQ6IRT3 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.27□□□□□ -0.61
ParpbpQ6IRT3 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.27□□□□□ -0.61
ParpbpQ6IRT3 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.27□□□□□ -0.61
ParpbpQ6IRT3 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.27□□□□□ -0.61
ParpbpQ6IRT3 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.27□□□□□ -0.61
ParpbpQ6IRT3 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
ParpbpQ6IRT3 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
ParpbpQ6IRT3 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
ParpbpQ6IRT3 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
ParpbpQ6IRT3 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
ParpbpQ6IRT3 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
ParpbpQ6IRT3 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.27□□□□□ -0.61
ParpbpQ6IRT3 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
ParpbpQ6IRT3 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.27□□□□□ -0.61
ParpbpQ6IRT3 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
ParpbpQ6IRT3 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
ParpbpQ6IRT3 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
ParpbpQ6IRT3 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
ParpbpQ6IRT3 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
ParpbpQ6IRT3 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
ParpbpQ6IRT3 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ParpbpQ6IRT3 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
ParpbpQ6IRT3 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
ParpbpQ6IRT3 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
ParpbpQ6IRT3 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
ParpbpQ6IRT3 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
ParpbpQ6IRT3 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.26□□□□□ -0.61
ParpbpQ6IRT3 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ParpbpQ6IRT3 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ParpbpQ6IRT3 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.26□□□□□ -0.61
ParpbpQ6IRT3 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.26□□□□□ -0.61
ParpbpQ6IRT3 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ParpbpQ6IRT3 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ParpbpQ6IRT3 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.26□□□□□ -0.61
ParpbpQ6IRT3 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
ParpbpQ6IRT3 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
ParpbpQ6IRT3 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
ParpbpQ6IRT3 Gm23912-201ENSMUST00000104687 87 ntBASIC11.26□□□□□ -0.61
ParpbpQ6IRT3 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ParpbpQ6IRT3 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.26□□□□□ -0.61
ParpbpQ6IRT3 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.26□□□□□ -0.61
ParpbpQ6IRT3 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.26□□□□□ -0.61
ParpbpQ6IRT3 Gm25668-201ENSMUST00000157700 129 ntBASIC11.26□□□□□ -0.61
ParpbpQ6IRT3 Gm17376-201ENSMUST00000166016 84 ntBASIC11.26□□□□□ -0.61
ParpbpQ6IRT3 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
ParpbpQ6IRT3 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
ParpbpQ6IRT3 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.26□□□□□ -0.61
ParpbpQ6IRT3 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.26□□□□□ -0.61
ParpbpQ6IRT3 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.26□□□□□ -0.61
ParpbpQ6IRT3 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.26□□□□□ -0.61
ParpbpQ6IRT3 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
ParpbpQ6IRT3 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ParpbpQ6IRT3 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
ParpbpQ6IRT3 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
ParpbpQ6IRT3 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ParpbpQ6IRT3 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
ParpbpQ6IRT3 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.26□□□□□ -0.61
ParpbpQ6IRT3 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ParpbpQ6IRT3 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.26□□□□□ -0.61
ParpbpQ6IRT3 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
ParpbpQ6IRT3 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ParpbpQ6IRT3 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ParpbpQ6IRT3 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
ParpbpQ6IRT3 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
ParpbpQ6IRT3 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.26□□□□□ -0.61
ParpbpQ6IRT3 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ParpbpQ6IRT3 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
ParpbpQ6IRT3 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ParpbpQ6IRT3 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
ParpbpQ6IRT3 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ParpbpQ6IRT3 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ParpbpQ6IRT3 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ParpbpQ6IRT3 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
ParpbpQ6IRT3 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
ParpbpQ6IRT3 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
ParpbpQ6IRT3 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
ParpbpQ6IRT3 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ParpbpQ6IRT3 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.25□□□□□ -0.61
ParpbpQ6IRT3 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ParpbpQ6IRT3 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.25□□□□□ -0.61
ParpbpQ6IRT3 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
ParpbpQ6IRT3 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
ParpbpQ6IRT3 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
ParpbpQ6IRT3 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
ParpbpQ6IRT3 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
ParpbpQ6IRT3 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ParpbpQ6IRT3 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
ParpbpQ6IRT3 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms