Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt39Q6IFX4 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Krt39Q6IFX4 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt39Q6IFX4 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Krt39Q6IFX4 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Krt39Q6IFX4 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Krt39Q6IFX4 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Krt39Q6IFX4 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Krt39Q6IFX4 Gm6023-201ENSMUST00000118217 606 ntBASIC13.22□□□□□ -0.29
Krt39Q6IFX4 Gm4986-201ENSMUST00000119731 549 ntBASIC13.22□□□□□ -0.29
Krt39Q6IFX4 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC13.22□□□□□ -0.29
Krt39Q6IFX4 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.22□□□□□ -0.29
Krt39Q6IFX4 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC13.22□□□□□ -0.29
Krt39Q6IFX4 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
Krt39Q6IFX4 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Krt39Q6IFX4 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt39Q6IFX4 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Krt39Q6IFX4 Gm38158-201ENSMUST00000194617 339 ntBASIC13.22□□□□□ -0.29
Krt39Q6IFX4 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Krt39Q6IFX4 Gm7619-201ENSMUST00000210649 1282 ntBASIC13.22□□□□□ -0.29
Krt39Q6IFX4 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC13.22□□□□□ -0.29
Krt39Q6IFX4 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.22□□□□□ -0.29
Krt39Q6IFX4 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Krt39Q6IFX4 Gm8399-201ENSMUST00000082300 1117 ntBASIC13.22□□□□□ -0.29
Krt39Q6IFX4 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Krt39Q6IFX4 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt39Q6IFX4 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Krt39Q6IFX4 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Krt39Q6IFX4 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt39Q6IFX4 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt39Q6IFX4 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Krt39Q6IFX4 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt39Q6IFX4 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Krt39Q6IFX4 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Krt39Q6IFX4 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Krt39Q6IFX4 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Krt39Q6IFX4 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Krt39Q6IFX4 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Krt39Q6IFX4 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC13.21□□□□□ -0.29
Krt39Q6IFX4 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Krt39Q6IFX4 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Krt39Q6IFX4 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Krt39Q6IFX4 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Krt39Q6IFX4 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Krt39Q6IFX4 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Krt39Q6IFX4 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC13.21□□□□□ -0.29
Krt39Q6IFX4 Gm5940-201ENSMUST00000117582 1068 ntBASIC13.21□□□□□ -0.29
Krt39Q6IFX4 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Krt39Q6IFX4 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Krt39Q6IFX4 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.21□□□□□ -0.29
Krt39Q6IFX4 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.21□□□□□ -0.29
Krt39Q6IFX4 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Krt39Q6IFX4 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC13.21□□□□□ -0.29
Krt39Q6IFX4 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.21□□□□□ -0.29
Krt39Q6IFX4 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.21□□□□□ -0.29
Krt39Q6IFX4 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Krt39Q6IFX4 Gm5850-201ENSMUST00000192923 1206 ntBASIC13.21□□□□□ -0.29
Krt39Q6IFX4 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.21□□□□□ -0.29
Krt39Q6IFX4 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.21□□□□□ -0.29
Krt39Q6IFX4 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC13.21□□□□□ -0.29
Krt39Q6IFX4 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.21□□□□□ -0.29
Krt39Q6IFX4 Gm7399-201ENSMUST00000032395 858 ntBASIC13.21□□□□□ -0.29
Krt39Q6IFX4 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Krt39Q6IFX4 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Krt39Q6IFX4 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC13.21□□□□□ -0.29
Krt39Q6IFX4 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Krt39Q6IFX4 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Krt39Q6IFX4 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Krt39Q6IFX4 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Krt39Q6IFX4 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Krt39Q6IFX4 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Krt39Q6IFX4 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
Krt39Q6IFX4 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Krt39Q6IFX4 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Krt39Q6IFX4 Gm37931-201ENSMUST00000194686 2866 ntBASIC13.21□□□□□ -0.3
Krt39Q6IFX4 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Krt39Q6IFX4 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Krt39Q6IFX4 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Krt39Q6IFX4 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Krt39Q6IFX4 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Krt39Q6IFX4 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Krt39Q6IFX4 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Krt39Q6IFX4 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Krt39Q6IFX4 Gm37348-201ENSMUST00000193104 1789 ntBASIC13.2□□□□□ -0.3
Krt39Q6IFX4 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Krt39Q6IFX4 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Krt39Q6IFX4 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Krt39Q6IFX4 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Krt39Q6IFX4 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Krt39Q6IFX4 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Krt39Q6IFX4 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Krt39Q6IFX4 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Krt39Q6IFX4 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Krt39Q6IFX4 Gm12201-201ENSMUST00000120657 1234 ntBASIC13.2□□□□□ -0.3
Krt39Q6IFX4 Gm12164-201ENSMUST00000121695 551 ntBASIC13.2□□□□□ -0.3
Krt39Q6IFX4 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Krt39Q6IFX4 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.2□□□□□ -0.3
Krt39Q6IFX4 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Krt39Q6IFX4 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Krt39Q6IFX4 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms