Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Gm37348-201ENSMUST00000193104 1789 ntBASIC14.14□□□□□ -0.15
Ctr9Q62018 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ctr9Q62018 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ctr9Q62018 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ctr9Q62018 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ctr9Q62018 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC14.14□□□□□ -0.15
Ctr9Q62018 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ctr9Q62018 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC14.14□□□□□ -0.15
Ctr9Q62018 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ctr9Q62018 Gm12857-201ENSMUST00000117678 592 ntBASIC14.14□□□□□ -0.15
Ctr9Q62018 Gm20426-201ENSMUST00000173657 440 ntBASIC14.14□□□□□ -0.15
Ctr9Q62018 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC14.14□□□□□ -0.15
Ctr9Q62018 Gm5733-201ENSMUST00000190232 939 ntBASIC14.14□□□□□ -0.15
Ctr9Q62018 Gm9555-201ENSMUST00000200908 583 ntBASIC14.14□□□□□ -0.15
Ctr9Q62018 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC14.14□□□□□ -0.15
Ctr9Q62018 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ctr9Q62018 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ctr9Q62018 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ctr9Q62018 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ctr9Q62018 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Ctr9Q62018 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ctr9Q62018 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ctr9Q62018 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ctr9Q62018 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ctr9Q62018 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ctr9Q62018 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC14.14□□□□□ -0.15
Ctr9Q62018 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ctr9Q62018 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ctr9Q62018 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ctr9Q62018 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ctr9Q62018 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ctr9Q62018 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC14.13□□□□□ -0.15
Ctr9Q62018 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ctr9Q62018 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ctr9Q62018 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ctr9Q62018 Gm8155-201ENSMUST00000216363 1612 ntBASIC14.13□□□□□ -0.15
Ctr9Q62018 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Ctr9Q62018 Gm14058-201ENSMUST00000116082 735 ntBASIC14.13□□□□□ -0.15
Ctr9Q62018 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC14.13□□□□□ -0.15
Ctr9Q62018 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ctr9Q62018 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC14.13□□□□□ -0.15
Ctr9Q62018 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ctr9Q62018 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ctr9Q62018 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ctr9Q62018 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ctr9Q62018 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ctr9Q62018 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ctr9Q62018 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ctr9Q62018 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ctr9Q62018 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ctr9Q62018 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ctr9Q62018 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Ctr9Q62018 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ctr9Q62018 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ctr9Q62018 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ctr9Q62018 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ctr9Q62018 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ctr9Q62018 AC129931.1-201ENSMUST00000228865 1861 ntBASIC14.12□□□□□ -0.15
Ctr9Q62018 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Ctr9Q62018 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ctr9Q62018 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ctr9Q62018 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC14.12□□□□□ -0.15
Ctr9Q62018 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ctr9Q62018 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
Ctr9Q62018 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC14.12□□□□□ -0.15
Ctr9Q62018 AC154404.1-201ENSMUST00000223601 2077 ntBASIC14.12□□□□□ -0.15
Ctr9Q62018 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ctr9Q62018 Gm12501-201ENSMUST00000119163 529 ntBASIC14.12□□□□□ -0.15
Ctr9Q62018 Gm6506-201ENSMUST00000119775 1136 ntBASIC14.12□□□□□ -0.15
Ctr9Q62018 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ctr9Q62018 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC14.12□□□□□ -0.15
Ctr9Q62018 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Ctr9Q62018 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ctr9Q62018 Gm28686-201ENSMUST00000187404 609 ntBASIC14.12□□□□□ -0.15
Ctr9Q62018 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ctr9Q62018 Gm42682-201ENSMUST00000198349 1265 ntBASIC14.12□□□□□ -0.15
Ctr9Q62018 Gm4482-201ENSMUST00000200876 742 ntBASIC14.12□□□□□ -0.15
Ctr9Q62018 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC14.12□□□□□ -0.15
Ctr9Q62018 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ctr9Q62018 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Ctr9Q62018 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ctr9Q62018 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ctr9Q62018 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ctr9Q62018 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ctr9Q62018 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ctr9Q62018 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Ctr9Q62018 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ctr9Q62018 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ctr9Q62018 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ctr9Q62018 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ctr9Q62018 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ctr9Q62018 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ctr9Q62018 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ctr9Q62018 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Ctr9Q62018 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ctr9Q62018 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ctr9Q62018 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ctr9Q62018 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ctr9Q62018 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ctr9Q62018 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms