Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gli3Q61602 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gli3Q61602 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Gli3Q61602 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Gli3Q61602 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gli3Q61602 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gli3Q61602 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Gli3Q61602 Gm13505-201ENSMUST00000121666 817 ntBASIC15.71■□□□□ 0.11
Gli3Q61602 Gm14441-201ENSMUST00000121960 540 ntBASIC15.71■□□□□ 0.11
Gli3Q61602 Gm12853-201ENSMUST00000134971 442 ntTSL 3 BASIC15.71■□□□□ 0.11
Gli3Q61602 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gli3Q61602 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gli3Q61602 Gm25591-201ENSMUST00000177317 94 ntBASIC15.71■□□□□ 0.11
Gli3Q61602 n-R5s130-201ENSMUST00000178128 119 ntBASIC15.71■□□□□ 0.11
Gli3Q61602 Gm24312-201ENSMUST00000178677 119 ntBASIC15.71■□□□□ 0.11
Gli3Q61602 n-R5s106-201ENSMUST00000179060 119 ntBASIC15.71■□□□□ 0.11
Gli3Q61602 n-R5s118-201ENSMUST00000179887 119 ntBASIC15.71■□□□□ 0.11
Gli3Q61602 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC15.71■□□□□ 0.11
Gli3Q61602 Gm18391-201ENSMUST00000217189 658 ntBASIC15.71■□□□□ 0.11
Gli3Q61602 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gli3Q61602 Gm6859-201ENSMUST00000218614 989 ntBASIC15.71■□□□□ 0.11
Gli3Q61602 AC116797.2-202ENSMUST00000223587 1017 ntBASIC15.71■□□□□ 0.11
Gli3Q61602 CT030035.1-201ENSMUST00000223964 935 ntBASIC15.71■□□□□ 0.11
Gli3Q61602 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Gli3Q61602 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gli3Q61602 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gli3Q61602 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gli3Q61602 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Gli3Q61602 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC15.71■□□□□ 0.11
Gli3Q61602 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gli3Q61602 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gli3Q61602 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Gli3Q61602 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Gli3Q61602 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gli3Q61602 Grk6-205ENSMUST00000224653 2976 ntBASIC15.71■□□□□ 0.11
Gli3Q61602 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC15.71■□□□□ 0.11
Gli3Q61602 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gli3Q61602 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gli3Q61602 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gli3Q61602 Gm38346-201ENSMUST00000192379 2639 ntBASIC15.71■□□□□ 0.11
Gli3Q61602 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Gli3Q61602 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gli3Q61602 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gli3Q61602 Matn2-206ENSMUST00000228570 2798 ntBASIC15.71■□□□□ 0.11
Gli3Q61602 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Gli3Q61602 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.71■□□□□ 0.1
Gli3Q61602 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Gli3Q61602 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Gli3Q61602 Crygf-202ENSMUST00000114027 594 ntTSL 2 BASIC15.7■□□□□ 0.1
Gli3Q61602 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC15.7■□□□□ 0.1
Gli3Q61602 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Gli3Q61602 Gm6291-201ENSMUST00000179994 309 ntBASIC15.7■□□□□ 0.1
Gli3Q61602 Gm19918-201ENSMUST00000194858 400 ntBASIC15.7■□□□□ 0.1
Gli3Q61602 CT010505.2-201ENSMUST00000227918 998 ntBASIC15.7■□□□□ 0.1
Gli3Q61602 Gm4778-201ENSMUST00000098878 1098 ntBASIC15.7■□□□□ 0.1
Gli3Q61602 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gli3Q61602 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gli3Q61602 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Gli3Q61602 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gli3Q61602 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC15.7■□□□□ 0.1
Gli3Q61602 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gli3Q61602 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Gli3Q61602 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Gli3Q61602 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Gli3Q61602 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Gli3Q61602 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Gli3Q61602 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gli3Q61602 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gli3Q61602 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Gli3Q61602 Gm9095-201ENSMUST00000117607 881 ntBASIC15.7■□□□□ 0.1
Gli3Q61602 Gm9097-201ENSMUST00000120514 880 ntBASIC15.7■□□□□ 0.1
Gli3Q61602 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC15.7■□□□□ 0.1
Gli3Q61602 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Gli3Q61602 Gm36980-201ENSMUST00000195643 622 ntBASIC15.7■□□□□ 0.1
Gli3Q61602 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC15.7■□□□□ 0.1
Gli3Q61602 Gm43460-201ENSMUST00000202491 1057 ntBASIC15.7■□□□□ 0.1
Gli3Q61602 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC15.7■□□□□ 0.1
Gli3Q61602 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Gli3Q61602 AC164614.1-201ENSMUST00000216038 397 ntBASIC15.7■□□□□ 0.1
Gli3Q61602 AC124503.1-201ENSMUST00000218524 526 ntTSL 3 BASIC15.7■□□□□ 0.1
Gli3Q61602 Gm33016-201ENSMUST00000221224 677 ntTSL 3 BASIC15.7■□□□□ 0.1
Gli3Q61602 Gal-201ENSMUST00000025842 712 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gli3Q61602 Clec1b-201ENSMUST00000032262 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gli3Q61602 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Gli3Q61602 Gm7589-201ENSMUST00000085631 534 ntBASIC15.7■□□□□ 0.1
Gli3Q61602 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Gli3Q61602 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Gli3Q61602 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gli3Q61602 Gm5159-201ENSMUST00000212733 1652 ntBASIC15.69■□□□□ 0.1
Gli3Q61602 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC15.69■□□□□ 0.1
Gli3Q61602 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gli3Q61602 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Gli3Q61602 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gli3Q61602 AC158777.1-201ENSMUST00000226216 1724 ntBASIC15.69■□□□□ 0.1
Gli3Q61602 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC15.69■□□□□ 0.1
Gli3Q61602 AC123834.1-201ENSMUST00000225346 2043 ntBASIC15.69■□□□□ 0.1
Gli3Q61602 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gli3Q61602 Map1b-203ENSMUST00000223725 2669 ntBASIC15.69■□□□□ 0.1
Gli3Q61602 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gli3Q61602 Gm14639-201ENSMUST00000120850 866 ntBASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms