Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ift88Q61371 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ift88Q61371 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ift88Q61371 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ift88Q61371 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ift88Q61371 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC13.22□□□□□ -0.29
Ift88Q61371 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC13.22□□□□□ -0.29
Ift88Q61371 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Ift88Q61371 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ift88Q61371 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ift88Q61371 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.22□□□□□ -0.29
Ift88Q61371 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ift88Q61371 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Ift88Q61371 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Ift88Q61371 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Ift88Q61371 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ift88Q61371 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Ift88Q61371 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ift88Q61371 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ift88Q61371 AC126257.1-201ENSMUST00000213195 1536 ntBASIC13.22□□□□□ -0.29
Ift88Q61371 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ift88Q61371 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ift88Q61371 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Ift88Q61371 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ift88Q61371 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ift88Q61371 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Ift88Q61371 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Ift88Q61371 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ift88Q61371 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ift88Q61371 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ift88Q61371 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ift88Q61371 Gm3836-201ENSMUST00000211377 1613 ntBASIC13.21□□□□□ -0.29
Ift88Q61371 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Ift88Q61371 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ift88Q61371 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ift88Q61371 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ift88Q61371 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ift88Q61371 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ift88Q61371 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ift88Q61371 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ift88Q61371 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ift88Q61371 Gm4986-201ENSMUST00000119731 549 ntBASIC13.21□□□□□ -0.29
Ift88Q61371 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.21□□□□□ -0.29
Ift88Q61371 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Ift88Q61371 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.21□□□□□ -0.29
Ift88Q61371 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC13.21□□□□□ -0.29
Ift88Q61371 Gm38241-201ENSMUST00000192641 898 ntBASIC13.21□□□□□ -0.29
Ift88Q61371 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.21□□□□□ -0.29
Ift88Q61371 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC13.21□□□□□ -0.29
Ift88Q61371 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ift88Q61371 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ift88Q61371 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ift88Q61371 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Ift88Q61371 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC13.21□□□□□ -0.3
Ift88Q61371 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ift88Q61371 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.21□□□□□ -0.3
Ift88Q61371 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC13.21□□□□□ -0.3
Ift88Q61371 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ift88Q61371 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ift88Q61371 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Ift88Q61371 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ift88Q61371 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ift88Q61371 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ift88Q61371 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ift88Q61371 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC13.2□□□□□ -0.3
Ift88Q61371 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Ift88Q61371 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ift88Q61371 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC13.2□□□□□ -0.3
Ift88Q61371 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ift88Q61371 Gm22018-201ENSMUST00000104357 131 ntBASIC13.2□□□□□ -0.3
Ift88Q61371 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.2□□□□□ -0.3
Ift88Q61371 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ift88Q61371 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ift88Q61371 Gm14441-201ENSMUST00000121960 540 ntBASIC13.2□□□□□ -0.3
Ift88Q61371 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ift88Q61371 Gm27514-201ENSMUST00000183692 110 ntBASIC13.2□□□□□ -0.3
Ift88Q61371 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.2□□□□□ -0.3
Ift88Q61371 Gm19994-201ENSMUST00000217086 586 ntBASIC13.2□□□□□ -0.3
Ift88Q61371 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ift88Q61371 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ift88Q61371 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC13.2□□□□□ -0.3
Ift88Q61371 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ift88Q61371 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ift88Q61371 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ift88Q61371 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ift88Q61371 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ift88Q61371 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ift88Q61371 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ift88Q61371 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ift88Q61371 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ift88Q61371 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ift88Q61371 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Ift88Q61371 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ift88Q61371 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ift88Q61371 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC13.19□□□□□ -0.3
Ift88Q61371 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ift88Q61371 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.19□□□□□ -0.3
Ift88Q61371 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC13.19□□□□□ -0.3
Ift88Q61371 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ift88Q61371 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms