Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nr1h4Q60641 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.43□□□□□ -0.58
Nr1h4Q60641 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.43□□□□□ -0.58
Nr1h4Q60641 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.43□□□□□ -0.58
Nr1h4Q60641 Gm39404-201ENSMUST00000216350 313 ntBASIC11.43□□□□□ -0.58
Nr1h4Q60641 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.43□□□□□ -0.58
Nr1h4Q60641 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.43□□□□□ -0.58
Nr1h4Q60641 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nr1h4Q60641 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nr1h4Q60641 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nr1h4Q60641 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.43□□□□□ -0.58
Nr1h4Q60641 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.43□□□□□ -0.58
Nr1h4Q60641 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.43□□□□□ -0.58
Nr1h4Q60641 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
Nr1h4Q60641 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nr1h4Q60641 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nr1h4Q60641 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nr1h4Q60641 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nr1h4Q60641 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nr1h4Q60641 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nr1h4Q60641 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nr1h4Q60641 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nr1h4Q60641 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nr1h4Q60641 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nr1h4Q60641 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nr1h4Q60641 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nr1h4Q60641 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nr1h4Q60641 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nr1h4Q60641 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nr1h4Q60641 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nr1h4Q60641 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Nr1h4Q60641 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nr1h4Q60641 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Nr1h4Q60641 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.42□□□□□ -0.58
Nr1h4Q60641 Gm11591-201ENSMUST00000120063 702 ntBASIC11.42□□□□□ -0.58
Nr1h4Q60641 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.42□□□□□ -0.58
Nr1h4Q60641 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nr1h4Q60641 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.42□□□□□ -0.58
Nr1h4Q60641 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nr1h4Q60641 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.42□□□□□ -0.58
Nr1h4Q60641 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.42□□□□□ -0.58
Nr1h4Q60641 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nr1h4Q60641 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.42□□□□□ -0.58
Nr1h4Q60641 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Nr1h4Q60641 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Nr1h4Q60641 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nr1h4Q60641 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nr1h4Q60641 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nr1h4Q60641 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.42□□□□□ -0.58
Nr1h4Q60641 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nr1h4Q60641 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nr1h4Q60641 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nr1h4Q60641 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.42□□□□□ -0.58
Nr1h4Q60641 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nr1h4Q60641 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Nr1h4Q60641 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nr1h4Q60641 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Nr1h4Q60641 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Nr1h4Q60641 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nr1h4Q60641 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nr1h4Q60641 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Nr1h4Q60641 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.42□□□□□ -0.58
Nr1h4Q60641 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nr1h4Q60641 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nr1h4Q60641 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.41□□□□□ -0.58
Nr1h4Q60641 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Nr1h4Q60641 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nr1h4Q60641 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.41□□□□□ -0.58
Nr1h4Q60641 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nr1h4Q60641 Gm45501-201ENSMUST00000211468 2526 ntBASIC11.41□□□□□ -0.58
Nr1h4Q60641 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nr1h4Q60641 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nr1h4Q60641 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nr1h4Q60641 AC121870.2-201ENSMUST00000214343 1870 ntBASIC11.41□□□□□ -0.58
Nr1h4Q60641 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nr1h4Q60641 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nr1h4Q60641 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.41□□□□□ -0.58
Nr1h4Q60641 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.41□□□□□ -0.58
Nr1h4Q60641 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Nr1h4Q60641 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.41□□□□□ -0.58
Nr1h4Q60641 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Nr1h4Q60641 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nr1h4Q60641 Gm29127-201ENSMUST00000188304 517 ntBASIC11.41□□□□□ -0.58
Nr1h4Q60641 Gm18711-201ENSMUST00000199341 750 ntBASIC11.41□□□□□ -0.58
Nr1h4Q60641 Gm9794-201ENSMUST00000202370 423 ntBASIC11.41□□□□□ -0.58
Nr1h4Q60641 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC11.41□□□□□ -0.58
Nr1h4Q60641 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nr1h4Q60641 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nr1h4Q60641 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Nr1h4Q60641 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nr1h4Q60641 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nr1h4Q60641 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nr1h4Q60641 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nr1h4Q60641 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nr1h4Q60641 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nr1h4Q60641 Mir124a-1hg-201ENSMUST00000180610 4103 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nr1h4Q60641 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nr1h4Q60641 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Nr1h4Q60641 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nr1h4Q60641 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms