Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.75□□□□□ -0.37
Shroom1Q5SX79 Gm15131-201ENSMUST00000119124 595 ntBASIC12.75□□□□□ -0.37
Shroom1Q5SX79 Gm8566-201ENSMUST00000120174 465 ntBASIC12.75□□□□□ -0.37
Shroom1Q5SX79 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Shroom1Q5SX79 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.75□□□□□ -0.37
Shroom1Q5SX79 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Shroom1Q5SX79 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shroom1Q5SX79 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC12.75□□□□□ -0.37
Shroom1Q5SX79 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.75□□□□□ -0.37
Shroom1Q5SX79 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.75□□□□□ -0.37
Shroom1Q5SX79 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Shroom1Q5SX79 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Shroom1Q5SX79 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.75□□□□□ -0.37
Shroom1Q5SX79 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shroom1Q5SX79 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shroom1Q5SX79 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shroom1Q5SX79 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shroom1Q5SX79 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Shroom1Q5SX79 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Shroom1Q5SX79 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shroom1Q5SX79 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shroom1Q5SX79 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shroom1Q5SX79 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shroom1Q5SX79 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Shroom1Q5SX79 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shroom1Q5SX79 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.75□□□□□ -0.37
Shroom1Q5SX79 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shroom1Q5SX79 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shroom1Q5SX79 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shroom1Q5SX79 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Shroom1Q5SX79 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.74□□□□□ -0.37
Shroom1Q5SX79 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shroom1Q5SX79 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shroom1Q5SX79 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shroom1Q5SX79 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shroom1Q5SX79 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.74□□□□□ -0.37
Shroom1Q5SX79 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shroom1Q5SX79 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Shroom1Q5SX79 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Shroom1Q5SX79 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shroom1Q5SX79 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shroom1Q5SX79 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Shroom1Q5SX79 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Shroom1Q5SX79 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shroom1Q5SX79 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC12.74□□□□□ -0.37
Shroom1Q5SX79 Gm11509-201ENSMUST00000117358 325 ntBASIC12.74□□□□□ -0.37
Shroom1Q5SX79 Gm7722-201ENSMUST00000120646 741 ntBASIC12.74□□□□□ -0.37
Shroom1Q5SX79 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.74□□□□□ -0.37
Shroom1Q5SX79 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC12.74□□□□□ -0.37
Shroom1Q5SX79 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Shroom1Q5SX79 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC12.74□□□□□ -0.37
Shroom1Q5SX79 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC12.74□□□□□ -0.37
Shroom1Q5SX79 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.74□□□□□ -0.37
Shroom1Q5SX79 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Shroom1Q5SX79 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.74□□□□□ -0.37
Shroom1Q5SX79 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.74□□□□□ -0.37
Shroom1Q5SX79 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shroom1Q5SX79 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shroom1Q5SX79 Gm10179-201ENSMUST00000086233 688 ntBASIC12.74□□□□□ -0.37
Shroom1Q5SX79 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shroom1Q5SX79 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shroom1Q5SX79 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.74□□□□□ -0.37
Shroom1Q5SX79 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.74□□□□□ -0.37
Shroom1Q5SX79 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.74□□□□□ -0.37
Shroom1Q5SX79 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shroom1Q5SX79 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shroom1Q5SX79 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shroom1Q5SX79 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shroom1Q5SX79 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Shroom1Q5SX79 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.73□□□□□ -0.37
Shroom1Q5SX79 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shroom1Q5SX79 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shroom1Q5SX79 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.73□□□□□ -0.37
Shroom1Q5SX79 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shroom1Q5SX79 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shroom1Q5SX79 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shroom1Q5SX79 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shroom1Q5SX79 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.73□□□□□ -0.37
Shroom1Q5SX79 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shroom1Q5SX79 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shroom1Q5SX79 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shroom1Q5SX79 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shroom1Q5SX79 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shroom1Q5SX79 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shroom1Q5SX79 Gm13461-201ENSMUST00000120980 662 ntBASIC12.73□□□□□ -0.37
Shroom1Q5SX79 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.73□□□□□ -0.37
Shroom1Q5SX79 Gm10051-201ENSMUST00000145209 414 ntBASIC12.73□□□□□ -0.37
Shroom1Q5SX79 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Shroom1Q5SX79 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.73□□□□□ -0.37
Shroom1Q5SX79 Gm8956-201ENSMUST00000203939 825 ntBASIC12.73□□□□□ -0.37
Shroom1Q5SX79 Gm43916-201ENSMUST00000205062 967 ntBASIC12.73□□□□□ -0.37
Shroom1Q5SX79 AC141438.2-201ENSMUST00000215068 271 ntBASIC12.73□□□□□ -0.37
Shroom1Q5SX79 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.73□□□□□ -0.37
Shroom1Q5SX79 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shroom1Q5SX79 AC135114.1-201ENSMUST00000228682 270 ntBASIC12.73□□□□□ -0.37
Shroom1Q5SX79 Ginm1-202ENSMUST00000065124 300 ntBASIC12.73□□□□□ -0.37
Shroom1Q5SX79 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Shroom1Q5SX79 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shroom1Q5SX79 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Shroom1Q5SX79 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms