Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC13.67□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC13.67□□□□□ -0.22
Ccdc88aQ5SNZ0 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC13.67□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC13.67□□□□□ -0.22
Ccdc88aQ5SNZ0 CT025553.1-201ENSMUST00000226292 299 ntBASIC13.67□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm25201-201ENSMUST00000083093 170 ntBASIC13.67□□□□□ -0.22
Ccdc88aQ5SNZ0 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc88aQ5SNZ0 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc88aQ5SNZ0 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc88aQ5SNZ0 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm13910-201ENSMUST00000121752 1428 ntBASIC13.67□□□□□ -0.22
Ccdc88aQ5SNZ0 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc88aQ5SNZ0 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC13.66□□□□□ -0.22
Ccdc88aQ5SNZ0 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc88aQ5SNZ0 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc88aQ5SNZ0 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC13.66□□□□□ -0.22
Ccdc88aQ5SNZ0 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ccdc88aQ5SNZ0 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ccdc88aQ5SNZ0 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc88aQ5SNZ0 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC13.66□□□□□ -0.22
Ccdc88aQ5SNZ0 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm11660-201ENSMUST00000120955 412 ntBASIC13.66□□□□□ -0.22
Ccdc88aQ5SNZ0 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC13.66□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC13.66□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc88aQ5SNZ0 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC13.66□□□□□ -0.22
Ccdc88aQ5SNZ0 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Ccdc88aQ5SNZ0 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc88aQ5SNZ0 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ccdc88aQ5SNZ0 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm7537-201ENSMUST00000221660 1414 ntBASIC13.66□□□□□ -0.22
Ccdc88aQ5SNZ0 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc88aQ5SNZ0 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC13.66□□□□□ -0.22
Ccdc88aQ5SNZ0 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc88aQ5SNZ0 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Ccdc88aQ5SNZ0 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc88aQ5SNZ0 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Ccdc88aQ5SNZ0 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc88aQ5SNZ0 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Ccdc88aQ5SNZ0 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Ccdc88aQ5SNZ0 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc88aQ5SNZ0 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc88aQ5SNZ0 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc88aQ5SNZ0 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm11663-201ENSMUST00000117888 290 ntBASIC13.65□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm27390-201ENSMUST00000184516 176 ntBASIC13.65□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm5714-201ENSMUST00000197343 566 ntBASIC13.65□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm5340-201ENSMUST00000203733 880 ntBASIC13.65□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm44421-201ENSMUST00000205064 1221 ntBASIC13.65□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm18204-201ENSMUST00000209835 793 ntBASIC13.65□□□□□ -0.22
Ccdc88aQ5SNZ0 AC154572.1-201ENSMUST00000226098 1204 ntBASIC13.65□□□□□ -0.22
Ccdc88aQ5SNZ0 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc88aQ5SNZ0 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc88aQ5SNZ0 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc88aQ5SNZ0 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Ccdc88aQ5SNZ0 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.65□□□□□ -0.22
Ccdc88aQ5SNZ0 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc88aQ5SNZ0 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc88aQ5SNZ0 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm11470-201ENSMUST00000118868 1475 ntBASIC13.65□□□□□ -0.22
Ccdc88aQ5SNZ0 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc88aQ5SNZ0 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc88aQ5SNZ0 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Ccdc88aQ5SNZ0 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC13.65□□□□□ -0.22
Ccdc88aQ5SNZ0 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC13.65□□□□□ -0.22
Ccdc88aQ5SNZ0 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm9645-201ENSMUST00000197131 792 ntBASIC13.65□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm45594-201ENSMUST00000211717 241 ntBASIC13.65□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC13.65□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm7959-201ENSMUST00000221823 1078 ntBASIC13.65□□□□□ -0.22
Ccdc88aQ5SNZ0 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc88aQ5SNZ0 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc88aQ5SNZ0 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc88aQ5SNZ0 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.23
Ccdc88aQ5SNZ0 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc88aQ5SNZ0 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc88aQ5SNZ0 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc88aQ5SNZ0 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc88aQ5SNZ0 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc88aQ5SNZ0 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc88aQ5SNZ0 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc88aQ5SNZ0 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc88aQ5SNZ0 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ccdc88aQ5SNZ0 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc88aQ5SNZ0 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ccdc88aQ5SNZ0 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc88aQ5SNZ0 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc88aQ5SNZ0 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc88aQ5SNZ0 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc88aQ5SNZ0 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc88aQ5SNZ0 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc88aQ5SNZ0 Gm14193-201ENSMUST00000105067 153 ntBASIC13.64□□□□□ -0.23
Ccdc88aQ5SNZ0 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc88aQ5SNZ0 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Ccdc88aQ5SNZ0 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc88aQ5SNZ0 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc88aQ5SNZ0 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms