Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.83□□□□□ -0.51
Scn2bQ56A07 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.83□□□□□ -0.51
Scn2bQ56A07 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
Scn2bQ56A07 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn2bQ56A07 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn2bQ56A07 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Gm23912-201ENSMUST00000104687 87 ntBASIC11.83□□□□□ -0.52
Scn2bQ56A07 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.83□□□□□ -0.52
Scn2bQ56A07 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Scn2bQ56A07 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.83□□□□□ -0.52
Scn2bQ56A07 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.83□□□□□ -0.52
Scn2bQ56A07 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.83□□□□□ -0.52
Scn2bQ56A07 Gm37201-201ENSMUST00000191845 523 ntBASIC11.83□□□□□ -0.52
Scn2bQ56A07 Gm6621-201ENSMUST00000193251 772 ntBASIC11.83□□□□□ -0.52
Scn2bQ56A07 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn2bQ56A07 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.82□□□□□ -0.52
Scn2bQ56A07 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.82□□□□□ -0.52
Scn2bQ56A07 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn2bQ56A07 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn2bQ56A07 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.82□□□□□ -0.52
Scn2bQ56A07 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn2bQ56A07 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Scn2bQ56A07 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn2bQ56A07 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn2bQ56A07 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn2bQ56A07 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.82□□□□□ -0.52
Scn2bQ56A07 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Scn2bQ56A07 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Scn2bQ56A07 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Scn2bQ56A07 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Scn2bQ56A07 Gm11222-201ENSMUST00000119005 738 ntBASIC11.82□□□□□ -0.52
Scn2bQ56A07 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.82□□□□□ -0.52
Scn2bQ56A07 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.82□□□□□ -0.52
Scn2bQ56A07 Gm24845-201ENSMUST00000158034 109 ntBASIC11.82□□□□□ -0.52
Scn2bQ56A07 Gm25043-201ENSMUST00000158604 212 ntBASIC11.82□□□□□ -0.52
Scn2bQ56A07 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.82□□□□□ -0.52
Scn2bQ56A07 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Scn2bQ56A07 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Scn2bQ56A07 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn2bQ56A07 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Scn2bQ56A07 Gm5706-201ENSMUST00000181525 993 ntBASIC11.82□□□□□ -0.52
Scn2bQ56A07 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.82□□□□□ -0.52
Scn2bQ56A07 Mir8109-201ENSMUST00000184375 117 ntBASIC11.82□□□□□ -0.52
Scn2bQ56A07 Gm28882-201ENSMUST00000185504 314 ntBASIC11.82□□□□□ -0.52
Scn2bQ56A07 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.82□□□□□ -0.52
Scn2bQ56A07 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.82□□□□□ -0.52
Scn2bQ56A07 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms