Protein–RNA interactions for Protein: Q3V079

Bbof1, Basal body-orientation factor 1, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bbof1Q3V079 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Bbof1Q3V079 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Bbof1Q3V079 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Bbof1Q3V079 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC13.17□□□□□ -0.3
Bbof1Q3V079 Ighv1-62-201ENSMUST00000193406 350 ntBASIC13.17□□□□□ -0.3
Bbof1Q3V079 Gm37259-201ENSMUST00000193903 849 ntBASIC13.17□□□□□ -0.3
Bbof1Q3V079 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Bbof1Q3V079 AC166344.1-202ENSMUST00000224139 234 ntBASIC13.17□□□□□ -0.3
Bbof1Q3V079 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Bbof1Q3V079 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Bbof1Q3V079 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Bbof1Q3V079 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Bbof1Q3V079 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Bbof1Q3V079 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Bbof1Q3V079 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Bbof1Q3V079 Gm4780-202ENSMUST00000215200 2644 ntBASIC13.17□□□□□ -0.3
Bbof1Q3V079 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Bbof1Q3V079 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Bbof1Q3V079 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Bbof1Q3V079 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Bbof1Q3V079 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Bbof1Q3V079 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Bbof1Q3V079 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Bbof1Q3V079 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Bbof1Q3V079 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Bbof1Q3V079 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Bbof1Q3V079 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.16□□□□□ -0.3
Bbof1Q3V079 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Bbof1Q3V079 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Bbof1Q3V079 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Bbof1Q3V079 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Bbof1Q3V079 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Bbof1Q3V079 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Bbof1Q3V079 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Bbof1Q3V079 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Bbof1Q3V079 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Bbof1Q3V079 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Bbof1Q3V079 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Bbof1Q3V079 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Bbof1Q3V079 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Bbof1Q3V079 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Bbof1Q3V079 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Bbof1Q3V079 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Bbof1Q3V079 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.16□□□□□ -0.3
Bbof1Q3V079 Gm22323-201ENSMUST00000103832 109 ntBASIC13.16□□□□□ -0.3
Bbof1Q3V079 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Bbof1Q3V079 Gm14109-201ENSMUST00000118814 309 ntBASIC13.16□□□□□ -0.3
Bbof1Q3V079 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.16□□□□□ -0.3
Bbof1Q3V079 Gm14832-201ENSMUST00000121289 322 ntBASIC13.16□□□□□ -0.3
Bbof1Q3V079 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Bbof1Q3V079 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Bbof1Q3V079 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.16□□□□□ -0.3
Bbof1Q3V079 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC13.16□□□□□ -0.3
Bbof1Q3V079 Gm8712-201ENSMUST00000221090 701 ntBASIC13.16□□□□□ -0.3
Bbof1Q3V079 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.16□□□□□ -0.3
Bbof1Q3V079 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.16□□□□□ -0.3
Bbof1Q3V079 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Bbof1Q3V079 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Bbof1Q3V079 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Bbof1Q3V079 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Bbof1Q3V079 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Bbof1Q3V079 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Bbof1Q3V079 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Bbof1Q3V079 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Bbof1Q3V079 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Bbof1Q3V079 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC13.16□□□□□ -0.3
Bbof1Q3V079 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Bbof1Q3V079 Gm10782-202ENSMUST00000223775 1480 ntBASIC13.16□□□□□ -0.3
Bbof1Q3V079 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Bbof1Q3V079 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Bbof1Q3V079 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Bbof1Q3V079 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC13.16□□□□□ -0.3
Bbof1Q3V079 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC13.16□□□□□ -0.3
Bbof1Q3V079 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Bbof1Q3V079 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Bbof1Q3V079 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Bbof1Q3V079 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Bbof1Q3V079 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.3
Bbof1Q3V079 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Bbof1Q3V079 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Bbof1Q3V079 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Bbof1Q3V079 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Bbof1Q3V079 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Bbof1Q3V079 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Bbof1Q3V079 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Bbof1Q3V079 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Bbof1Q3V079 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Bbof1Q3V079 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Bbof1Q3V079 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Bbof1Q3V079 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Bbof1Q3V079 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC13.15□□□□□ -0.3
Bbof1Q3V079 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Bbof1Q3V079 Gm15276-201ENSMUST00000145953 498 ntBASIC13.15□□□□□ -0.3
Bbof1Q3V079 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Bbof1Q3V079 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Bbof1Q3V079 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.15□□□□□ -0.3
Bbof1Q3V079 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Bbof1Q3V079 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.15□□□□□ -0.3
Bbof1Q3V079 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.15□□□□□ -0.3
Bbof1Q3V079 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms