Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fam196aQ3USH1 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fam196aQ3USH1 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fam196aQ3USH1 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fam196aQ3USH1 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fam196aQ3USH1 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Fam196aQ3USH1 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Fam196aQ3USH1 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fam196aQ3USH1 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Fam196aQ3USH1 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Fam196aQ3USH1 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fam196aQ3USH1 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fam196aQ3USH1 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Fam196aQ3USH1 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC12.06□□□□□ -0.48
Fam196aQ3USH1 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC12.06□□□□□ -0.48
Fam196aQ3USH1 Gm12274-201ENSMUST00000120062 385 ntBASIC12.06□□□□□ -0.48
Fam196aQ3USH1 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fam196aQ3USH1 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Fam196aQ3USH1 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Fam196aQ3USH1 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC12.06□□□□□ -0.48
Fam196aQ3USH1 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Fam196aQ3USH1 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Fam196aQ3USH1 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Fam196aQ3USH1 Gm26982-201ENSMUST00000182250 1151 ntBASIC12.06□□□□□ -0.48
Fam196aQ3USH1 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC12.06□□□□□ -0.48
Fam196aQ3USH1 Gm28833-201ENSMUST00000189671 559 ntBASIC12.06□□□□□ -0.48
Fam196aQ3USH1 Gm37852-201ENSMUST00000193027 350 ntBASIC12.06□□□□□ -0.48
Fam196aQ3USH1 Gm9136-201ENSMUST00000193368 454 ntBASIC12.06□□□□□ -0.48
Fam196aQ3USH1 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC12.06□□□□□ -0.48
Fam196aQ3USH1 Gm8574-201ENSMUST00000203207 924 ntBASIC12.06□□□□□ -0.48
Fam196aQ3USH1 Gm7082-201ENSMUST00000209880 969 ntBASIC12.06□□□□□ -0.48
Fam196aQ3USH1 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Fam196aQ3USH1 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.06□□□□□ -0.48
Fam196aQ3USH1 AC114645.1-201ENSMUST00000215831 187 ntBASIC12.06□□□□□ -0.48
Fam196aQ3USH1 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.06□□□□□ -0.48
Fam196aQ3USH1 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fam196aQ3USH1 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fam196aQ3USH1 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fam196aQ3USH1 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fam196aQ3USH1 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fam196aQ3USH1 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Fam196aQ3USH1 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Fam196aQ3USH1 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fam196aQ3USH1 Gm18210-201ENSMUST00000209001 1524 ntBASIC12.06□□□□□ -0.48
Fam196aQ3USH1 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fam196aQ3USH1 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fam196aQ3USH1 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fam196aQ3USH1 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fam196aQ3USH1 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fam196aQ3USH1 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Fam196aQ3USH1 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fam196aQ3USH1 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fam196aQ3USH1 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Fam196aQ3USH1 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fam196aQ3USH1 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Fam196aQ3USH1 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fam196aQ3USH1 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fam196aQ3USH1 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Fam196aQ3USH1 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Fam196aQ3USH1 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC12.05□□□□□ -0.48
Fam196aQ3USH1 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fam196aQ3USH1 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC12.05□□□□□ -0.48
Fam196aQ3USH1 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Fam196aQ3USH1 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC12.05□□□□□ -0.48
Fam196aQ3USH1 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC12.05□□□□□ -0.48
Fam196aQ3USH1 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fam196aQ3USH1 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fam196aQ3USH1 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fam196aQ3USH1 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fam196aQ3USH1 Gm6831-202ENSMUST00000213025 1673 ntBASIC12.05□□□□□ -0.48
Fam196aQ3USH1 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.05□□□□□ -0.48
Fam196aQ3USH1 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fam196aQ3USH1 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Fam196aQ3USH1 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Fam196aQ3USH1 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fam196aQ3USH1 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fam196aQ3USH1 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fam196aQ3USH1 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fam196aQ3USH1 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Fam196aQ3USH1 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Fam196aQ3USH1 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fam196aQ3USH1 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Fam196aQ3USH1 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Fam196aQ3USH1 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fam196aQ3USH1 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fam196aQ3USH1 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Fam196aQ3USH1 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Fam196aQ3USH1 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Fam196aQ3USH1 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Fam196aQ3USH1 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Fam196aQ3USH1 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Fam196aQ3USH1 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Fam196aQ3USH1 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Fam196aQ3USH1 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Fam196aQ3USH1 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Fam196aQ3USH1 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Fam196aQ3USH1 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Fam196aQ3USH1 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Fam196aQ3USH1 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Fam196aQ3USH1 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms