Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.54□□□□□ -0.4
Cul4aQ3TCH7 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cul4aQ3TCH7 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cul4aQ3TCH7 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cul4aQ3TCH7 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.54□□□□□ -0.4
Cul4aQ3TCH7 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cul4aQ3TCH7 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cul4aQ3TCH7 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cul4aQ3TCH7 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cul4aQ3TCH7 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cul4aQ3TCH7 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.54□□□□□ -0.4
Cul4aQ3TCH7 Gm11793-201ENSMUST00000120433 981 ntBASIC12.54□□□□□ -0.4
Cul4aQ3TCH7 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.54□□□□□ -0.4
Cul4aQ3TCH7 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.54□□□□□ -0.4
Cul4aQ3TCH7 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cul4aQ3TCH7 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.54□□□□□ -0.4
Cul4aQ3TCH7 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cul4aQ3TCH7 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Cul4aQ3TCH7 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.54□□□□□ -0.4
Cul4aQ3TCH7 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cul4aQ3TCH7 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cul4aQ3TCH7 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cul4aQ3TCH7 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cul4aQ3TCH7 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cul4aQ3TCH7 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cul4aQ3TCH7 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cul4aQ3TCH7 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cul4aQ3TCH7 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Cul4aQ3TCH7 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cul4aQ3TCH7 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cul4aQ3TCH7 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cul4aQ3TCH7 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cul4aQ3TCH7 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cul4aQ3TCH7 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cul4aQ3TCH7 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.54□□□□□ -0.4
Cul4aQ3TCH7 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cul4aQ3TCH7 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cul4aQ3TCH7 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cul4aQ3TCH7 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cul4aQ3TCH7 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cul4aQ3TCH7 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cul4aQ3TCH7 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cul4aQ3TCH7 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.53□□□□□ -0.4
Cul4aQ3TCH7 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cul4aQ3TCH7 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cul4aQ3TCH7 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cul4aQ3TCH7 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cul4aQ3TCH7 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cul4aQ3TCH7 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cul4aQ3TCH7 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cul4aQ3TCH7 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cul4aQ3TCH7 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cul4aQ3TCH7 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.53□□□□□ -0.4
Cul4aQ3TCH7 Gm12015-201ENSMUST00000117065 843 ntBASIC12.53□□□□□ -0.4
Cul4aQ3TCH7 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cul4aQ3TCH7 Gm11700-201ENSMUST00000119409 403 ntBASIC12.53□□□□□ -0.4
Cul4aQ3TCH7 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.53□□□□□ -0.4
Cul4aQ3TCH7 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cul4aQ3TCH7 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cul4aQ3TCH7 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Cul4aQ3TCH7 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Cul4aQ3TCH7 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.53□□□□□ -0.4
Cul4aQ3TCH7 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cul4aQ3TCH7 Gm8712-201ENSMUST00000221090 701 ntBASIC12.53□□□□□ -0.4
Cul4aQ3TCH7 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.53□□□□□ -0.4
Cul4aQ3TCH7 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Cul4aQ3TCH7 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cul4aQ3TCH7 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cul4aQ3TCH7 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cul4aQ3TCH7 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cul4aQ3TCH7 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cul4aQ3TCH7 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cul4aQ3TCH7 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cul4aQ3TCH7 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.53□□□□□ -0.4
Cul4aQ3TCH7 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cul4aQ3TCH7 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cul4aQ3TCH7 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cul4aQ3TCH7 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cul4aQ3TCH7 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cul4aQ3TCH7 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC12.53□□□□□ -0.4
Cul4aQ3TCH7 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Cul4aQ3TCH7 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cul4aQ3TCH7 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cul4aQ3TCH7 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Cul4aQ3TCH7 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cul4aQ3TCH7 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cul4aQ3TCH7 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cul4aQ3TCH7 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cul4aQ3TCH7 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Cul4aQ3TCH7 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Cul4aQ3TCH7 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Cul4aQ3TCH7 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Cul4aQ3TCH7 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cul4aQ3TCH7 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cul4aQ3TCH7 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cul4aQ3TCH7 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cul4aQ3TCH7 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cul4aQ3TCH7 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.52□□□□□ -0.41
Cul4aQ3TCH7 Gm11425-201ENSMUST00000119608 498 ntBASIC12.52□□□□□ -0.41
Cul4aQ3TCH7 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 113 ms