Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gm19410-201ENSMUST00000207505 6352 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Trim63Q38HM4 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trim63Q38HM4 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trim63Q38HM4 Morc2a-201ENSMUST00000093389 5085 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trim63Q38HM4 Polr3b-201ENSMUST00000077175 4975 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trim63Q38HM4 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trim63Q38HM4 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trim63Q38HM4 Gm45428-201ENSMUST00000209619 1789 ntBASIC9.8□□□□□ -0.84
Trim63Q38HM4 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC9.8□□□□□ -0.84
Trim63Q38HM4 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trim63Q38HM4 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trim63Q38HM4 Vmn1r199-203ENSMUST00000227689 5537 ntAPPRIS ALT2 BASIC9.8□□□□□ -0.84
Trim63Q38HM4 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trim63Q38HM4 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trim63Q38HM4 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trim63Q38HM4 Casz1-201ENSMUST00000094464 4349 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trim63Q38HM4 Gpr35-203ENSMUST00000169198 4214 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trim63Q38HM4 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trim63Q38HM4 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trim63Q38HM4 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trim63Q38HM4 Cr1l-204ENSMUST00000193094 2776 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trim63Q38HM4 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trim63Q38HM4 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trim63Q38HM4 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC9.8□□□□□ -0.84
Trim63Q38HM4 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
Trim63Q38HM4 Gm6973-201ENSMUST00000117080 721 ntBASIC9.8□□□□□ -0.84
Trim63Q38HM4 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trim63Q38HM4 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC9.8□□□□□ -0.84
Trim63Q38HM4 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trim63Q38HM4 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trim63Q38HM4 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC9.8□□□□□ -0.84
Trim63Q38HM4 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trim63Q38HM4 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC9.8□□□□□ -0.84
Trim63Q38HM4 AC158529.1-201ENSMUST00000223618 239 ntBASIC9.8□□□□□ -0.84
Trim63Q38HM4 AC154806.6-201ENSMUST00000228192 202 ntBASIC9.8□□□□□ -0.84
Trim63Q38HM4 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trim63Q38HM4 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trim63Q38HM4 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trim63Q38HM4 Rps4l-201ENSMUST00000071745 943 ntBASIC9.8□□□□□ -0.84
Trim63Q38HM4 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trim63Q38HM4 Sorbs1-201ENSMUST00000099466 2223 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Trim63Q38HM4 Ddr1-203ENSMUST00000117301 3874 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trim63Q38HM4 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trim63Q38HM4 Carhsp1-201ENSMUST00000008537 2849 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trim63Q38HM4 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Trim63Q38HM4 4933407K13Rik-203ENSMUST00000138943 4364 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trim63Q38HM4 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC9.8□□□□□ -0.84
Trim63Q38HM4 Pomgnt1-204ENSMUST00000120083 2953 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Trim63Q38HM4 Gm8038-201ENSMUST00000164674 2044 ntBASIC9.8□□□□□ -0.84
Trim63Q38HM4 Cacna1d-207ENSMUST00000224198 6564 ntAPPRIS ALT2 BASIC9.8□□□□□ -0.84
Trim63Q38HM4 Itga10-201ENSMUST00000029744 5044 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Trim63Q38HM4 4930539E08Rik-201ENSMUST00000062357 4597 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trim63Q38HM4 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Trim63Q38HM4 Gm42934-201ENSMUST00000196920 1345 ntBASIC9.8□□□□□ -0.84
Trim63Q38HM4 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trim63Q38HM4 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trim63Q38HM4 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trim63Q38HM4 Diaph1-201ENSMUST00000025337 5596 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Trim63Q38HM4 Fgf1-202ENSMUST00000115582 2449 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trim63Q38HM4 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trim63Q38HM4 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Trim63Q38HM4 Dmtn-203ENSMUST00000110984 4176 ntAPPRIS P2 TSL 5 BASIC9.79□□□□□ -0.84
Trim63Q38HM4 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trim63Q38HM4 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Trim63Q38HM4 Gm38194-201ENSMUST00000194529 2211 ntBASIC9.79□□□□□ -0.84
Trim63Q38HM4 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trim63Q38HM4 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trim63Q38HM4 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trim63Q38HM4 Pcdh18-202ENSMUST00000191794 5146 ntTSL 5 BASIC9.79□□□□□ -0.84
Trim63Q38HM4 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Trim63Q38HM4 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trim63Q38HM4 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC9.79□□□□□ -0.84
Trim63Q38HM4 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC9.79□□□□□ -0.84
Trim63Q38HM4 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Trim63Q38HM4 4932431P20Rik-202ENSMUST00000141713 9288 ntBASIC9.79□□□□□ -0.84
Trim63Q38HM4 AC160405.1-201ENSMUST00000218207 1545 ntBASIC9.79□□□□□ -0.84
Trim63Q38HM4 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trim63Q38HM4 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC9.79□□□□□ -0.84
Trim63Q38HM4 Gm12537-201ENSMUST00000119266 1002 ntBASIC9.79□□□□□ -0.84
Trim63Q38HM4 Gm12070-201ENSMUST00000119551 1002 ntBASIC9.79□□□□□ -0.84
Trim63Q38HM4 Gm12671-201ENSMUST00000119978 1002 ntBASIC9.79□□□□□ -0.84
Trim63Q38HM4 Gm13292-201ENSMUST00000120014 1000 ntBASIC9.79□□□□□ -0.84
Trim63Q38HM4 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Trim63Q38HM4 Gm12403-201ENSMUST00000121384 959 ntBASIC9.79□□□□□ -0.84
Trim63Q38HM4 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC9.79□□□□□ -0.84
Trim63Q38HM4 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trim63Q38HM4 Gm10359-201ENSMUST00000180167 1002 ntBASIC9.79□□□□□ -0.84
Trim63Q38HM4 Gm12033-201ENSMUST00000180654 1002 ntBASIC9.79□□□□□ -0.84
Trim63Q38HM4 Gm5559-201ENSMUST00000180755 1002 ntBASIC9.79□□□□□ -0.84
Trim63Q38HM4 Gm4335-201ENSMUST00000182581 1004 ntBASIC9.79□□□□□ -0.84
Trim63Q38HM4 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC9.79□□□□□ -0.84
Trim63Q38HM4 Gm10576-201ENSMUST00000191927 825 ntBASIC9.79□□□□□ -0.84
Trim63Q38HM4 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC9.79□□□□□ -0.84
Trim63Q38HM4 AC121804.3-201ENSMUST00000223420 295 ntBASIC9.79□□□□□ -0.84
Trim63Q38HM4 AC131187.1-201ENSMUST00000224567 809 ntBASIC9.79□□□□□ -0.84
Trim63Q38HM4 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trim63Q38HM4 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Trim63Q38HM4 Rgs8-202ENSMUST00000111810 5614 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trim63Q38HM4 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trim63Q38HM4 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms