Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox4Q06831 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Sox4Q06831 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox4Q06831 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.79□□□□□ -0.52
Sox4Q06831 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.79□□□□□ -0.52
Sox4Q06831 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox4Q06831 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox4Q06831 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox4Q06831 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox4Q06831 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox4Q06831 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox4Q06831 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox4Q06831 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.79□□□□□ -0.52
Sox4Q06831 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox4Q06831 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sox4Q06831 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox4Q06831 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox4Q06831 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox4Q06831 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Sox4Q06831 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox4Q06831 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Sox4Q06831 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox4Q06831 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox4Q06831 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox4Q06831 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sox4Q06831 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox4Q06831 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox4Q06831 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.78□□□□□ -0.52
Sox4Q06831 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox4Q06831 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Sox4Q06831 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox4Q06831 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sox4Q06831 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.78□□□□□ -0.52
Sox4Q06831 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox4Q06831 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox4Q06831 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox4Q06831 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.78□□□□□ -0.52
Sox4Q06831 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Sox4Q06831 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Sox4Q06831 Gm11509-201ENSMUST00000117358 325 ntBASIC11.78□□□□□ -0.52
Sox4Q06831 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.78□□□□□ -0.52
Sox4Q06831 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.78□□□□□ -0.52
Sox4Q06831 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Sox4Q06831 Gm17040-202ENSMUST00000170597 889 ntBASIC11.78□□□□□ -0.52
Sox4Q06831 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.78□□□□□ -0.52
Sox4Q06831 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sox4Q06831 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Sox4Q06831 Mir7677-201ENSMUST00000184226 67 ntBASIC11.78□□□□□ -0.52
Sox4Q06831 Gm43184-201ENSMUST00000197247 542 ntBASIC11.78□□□□□ -0.52
Sox4Q06831 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.78□□□□□ -0.52
Sox4Q06831 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.78□□□□□ -0.52
Sox4Q06831 Gm4157-201ENSMUST00000211647 679 ntBASIC11.78□□□□□ -0.52
Sox4Q06831 Gm807-202ENSMUST00000224929 408 ntBASIC11.78□□□□□ -0.52
Sox4Q06831 Mettl6-204ENSMUST00000227595 1027 ntBASIC11.78□□□□□ -0.52
Sox4Q06831 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sox4Q06831 Gm26448-201ENSMUST00000082446 203 ntBASIC11.78□□□□□ -0.52
Sox4Q06831 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox4Q06831 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sox4Q06831 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Sox4Q06831 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.78□□□□□ -0.52
Sox4Q06831 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox4Q06831 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox4Q06831 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sox4Q06831 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox4Q06831 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox4Q06831 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox4Q06831 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.78□□□□□ -0.52
Sox4Q06831 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox4Q06831 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sox4Q06831 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.52
Sox4Q06831 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sox4Q06831 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Sox4Q06831 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sox4Q06831 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sox4Q06831 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox4Q06831 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox4Q06831 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox4Q06831 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox4Q06831 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
Sox4Q06831 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Sox4Q06831 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox4Q06831 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox4Q06831 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Sox4Q06831 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.77□□□□□ -0.53
Sox4Q06831 Gm12266-201ENSMUST00000120311 962 ntBASIC11.77□□□□□ -0.53
Sox4Q06831 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox4Q06831 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sox4Q06831 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sox4Q06831 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox4Q06831 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox4Q06831 Gm5705-201ENSMUST00000066241 711 ntBASIC11.77□□□□□ -0.53
Sox4Q06831 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.77□□□□□ -0.53
Sox4Q06831 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Sox4Q06831 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.77□□□□□ -0.53
Sox4Q06831 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.77□□□□□ -0.53
Sox4Q06831 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox4Q06831 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.77□□□□□ -0.53
Sox4Q06831 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Sox4Q06831 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox4Q06831 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms