Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Thbs3Q05895 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Thbs3Q05895 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Thbs3Q05895 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Thbs3Q05895 Gm22133-201ENSMUST00000102082 109 ntBASIC10.52□□□□□ -0.73
Thbs3Q05895 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Thbs3Q05895 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Thbs3Q05895 Gm13996-201ENSMUST00000118456 430 ntBASIC10.52□□□□□ -0.73
Thbs3Q05895 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Thbs3Q05895 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC10.52□□□□□ -0.73
Thbs3Q05895 Ighv4-2-201ENSMUST00000192975 362 ntBASIC10.52□□□□□ -0.73
Thbs3Q05895 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Thbs3Q05895 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC10.52□□□□□ -0.73
Thbs3Q05895 Olfr1347-205ENSMUST00000220413 964 ntBASIC10.52□□□□□ -0.73
Thbs3Q05895 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Thbs3Q05895 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Thbs3Q05895 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Thbs3Q05895 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Thbs3Q05895 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Thbs3Q05895 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Thbs3Q05895 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Thbs3Q05895 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Thbs3Q05895 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC10.52□□□□□ -0.73
Thbs3Q05895 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Thbs3Q05895 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Thbs3Q05895 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Thbs3Q05895 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Thbs3Q05895 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Thbs3Q05895 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Thbs3Q05895 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Thbs3Q05895 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Thbs3Q05895 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Thbs3Q05895 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Thbs3Q05895 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Thbs3Q05895 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.51□□□□□ -0.73
Thbs3Q05895 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Thbs3Q05895 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.73
Thbs3Q05895 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.51□□□□□ -0.73
Thbs3Q05895 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Thbs3Q05895 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Thbs3Q05895 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Thbs3Q05895 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Thbs3Q05895 Gm19817-201ENSMUST00000199764 2132 ntBASIC10.51□□□□□ -0.73
Thbs3Q05895 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Thbs3Q05895 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Thbs3Q05895 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Thbs3Q05895 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Thbs3Q05895 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Thbs3Q05895 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Thbs3Q05895 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Thbs3Q05895 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC10.51□□□□□ -0.73
Thbs3Q05895 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Thbs3Q05895 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC10.51□□□□□ -0.73
Thbs3Q05895 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC10.51□□□□□ -0.73
Thbs3Q05895 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC10.51□□□□□ -0.73
Thbs3Q05895 Gm4819-201ENSMUST00000182170 1009 ntBASIC10.51□□□□□ -0.73
Thbs3Q05895 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC10.51□□□□□ -0.73
Thbs3Q05895 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC10.51□□□□□ -0.73
Thbs3Q05895 Gm29615-201ENSMUST00000185371 697 ntBASIC10.51□□□□□ -0.73
Thbs3Q05895 Gm28224-201ENSMUST00000186078 697 ntBASIC10.51□□□□□ -0.73
Thbs3Q05895 Gm29001-201ENSMUST00000186177 697 ntBASIC10.51□□□□□ -0.73
Thbs3Q05895 Gm28292-201ENSMUST00000186593 697 ntBASIC10.51□□□□□ -0.73
Thbs3Q05895 Gm28101-201ENSMUST00000187608 697 ntBASIC10.51□□□□□ -0.73
Thbs3Q05895 Gm29076-201ENSMUST00000187689 697 ntBASIC10.51□□□□□ -0.73
Thbs3Q05895 Gm28302-201ENSMUST00000187931 697 ntBASIC10.51□□□□□ -0.73
Thbs3Q05895 Gm28646-201ENSMUST00000188220 697 ntBASIC10.51□□□□□ -0.73
Thbs3Q05895 Gm28205-201ENSMUST00000189177 697 ntBASIC10.51□□□□□ -0.73
Thbs3Q05895 Gm29032-201ENSMUST00000189797 697 ntBASIC10.51□□□□□ -0.73
Thbs3Q05895 Gm28695-201ENSMUST00000190300 697 ntBASIC10.51□□□□□ -0.73
Thbs3Q05895 Gm37448-201ENSMUST00000192795 697 ntBASIC10.51□□□□□ -0.73
Thbs3Q05895 Gm9678-201ENSMUST00000198979 1149 ntBASIC10.51□□□□□ -0.73
Thbs3Q05895 AY036118-201ENSMUST00000200021 923 ntBASIC10.51□□□□□ -0.73
Thbs3Q05895 Gm19287-201ENSMUST00000203190 358 ntBASIC10.51□□□□□ -0.73
Thbs3Q05895 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC10.51□□□□□ -0.73
Thbs3Q05895 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Thbs3Q05895 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Thbs3Q05895 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Thbs3Q05895 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC10.51□□□□□ -0.73
Thbs3Q05895 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Thbs3Q05895 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Thbs3Q05895 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Thbs3Q05895 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Thbs3Q05895 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.51□□□□□ -0.73
Thbs3Q05895 Gm43267-201ENSMUST00000199664 1796 ntBASIC10.51□□□□□ -0.73
Thbs3Q05895 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Thbs3Q05895 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Thbs3Q05895 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Thbs3Q05895 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Thbs3Q05895 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Thbs3Q05895 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Thbs3Q05895 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Thbs3Q05895 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Thbs3Q05895 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Thbs3Q05895 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Thbs3Q05895 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Thbs3Q05895 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Thbs3Q05895 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
Thbs3Q05895 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Thbs3Q05895 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.51□□□□□ -0.73
Thbs3Q05895 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms