Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Arhgap6-202ENSMUST00000087016 1310 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col9a1Q05722 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col9a1Q05722 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Col9a1Q05722 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Col9a1Q05722 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col9a1Q05722 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col9a1Q05722 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Col9a1Q05722 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Col9a1Q05722 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col9a1Q05722 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col9a1Q05722 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Col9a1Q05722 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Col9a1Q05722 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col9a1Q05722 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col9a1Q05722 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col9a1Q05722 Gm12291-201ENSMUST00000121627 311 ntBASIC12.08□□□□□ -0.48
Col9a1Q05722 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Col9a1Q05722 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col9a1Q05722 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC12.08□□□□□ -0.48
Col9a1Q05722 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col9a1Q05722 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Col9a1Q05722 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col9a1Q05722 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.08□□□□□ -0.48
Col9a1Q05722 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Col9a1Q05722 Gm17711-201ENSMUST00000172028 237 ntBASIC12.08□□□□□ -0.48
Col9a1Q05722 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC12.08□□□□□ -0.48
Col9a1Q05722 Gm20703-201ENSMUST00000175668 385 ntTSL 2 BASIC12.08□□□□□ -0.48
Col9a1Q05722 1500004A13Rik-201ENSMUST00000183374 891 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Col9a1Q05722 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Col9a1Q05722 Gm18985-201ENSMUST00000196472 1079 ntBASIC12.08□□□□□ -0.48
Col9a1Q05722 Prmt1-214ENSMUST00000209124 741 ntTSL 5 BASIC12.08□□□□□ -0.48
Col9a1Q05722 Gm19169-201ENSMUST00000220109 1246 ntBASIC12.08□□□□□ -0.48
Col9a1Q05722 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col9a1Q05722 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col9a1Q05722 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC12.08□□□□□ -0.48
Col9a1Q05722 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Col9a1Q05722 Gm26437-201ENSMUST00000082595 105 ntBASIC12.08□□□□□ -0.48
Col9a1Q05722 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col9a1Q05722 Asb11-202ENSMUST00000036858 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col9a1Q05722 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col9a1Q05722 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.08□□□□□ -0.48
Col9a1Q05722 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Col9a1Q05722 Gm19967-201ENSMUST00000179676 2138 ntTSL 5 BASIC12.08□□□□□ -0.48
Col9a1Q05722 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col9a1Q05722 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col9a1Q05722 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col9a1Q05722 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Col9a1Q05722 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.08□□□□□ -0.48
Col9a1Q05722 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col9a1Q05722 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col9a1Q05722 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col9a1Q05722 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a1Q05722 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Col9a1Q05722 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a1Q05722 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a1Q05722 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a1Q05722 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a1Q05722 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.07□□□□□ -0.48
Col9a1Q05722 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a1Q05722 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a1Q05722 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a1Q05722 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a1Q05722 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a1Q05722 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Col9a1Q05722 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a1Q05722 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a1Q05722 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a1Q05722 Gm14854-201ENSMUST00000117758 841 ntBASIC12.07□□□□□ -0.48
Col9a1Q05722 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.07□□□□□ -0.48
Col9a1Q05722 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a1Q05722 Gm14052-201ENSMUST00000121434 1031 ntBASIC12.07□□□□□ -0.48
Col9a1Q05722 Glrx2-206ENSMUST00000145969 924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a1Q05722 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC12.07□□□□□ -0.48
Col9a1Q05722 Gm6612-201ENSMUST00000170777 395 ntBASIC12.07□□□□□ -0.48
Col9a1Q05722 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Col9a1Q05722 Gm26982-201ENSMUST00000182250 1151 ntBASIC12.07□□□□□ -0.48
Col9a1Q05722 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.07□□□□□ -0.48
Col9a1Q05722 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a1Q05722 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a1Q05722 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC12.07□□□□□ -0.48
Col9a1Q05722 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.07□□□□□ -0.48
Col9a1Q05722 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC12.07□□□□□ -0.48
Col9a1Q05722 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a1Q05722 Gm45078-201ENSMUST00000205343 546 ntBASIC12.07□□□□□ -0.48
Col9a1Q05722 Gm45845-201ENSMUST00000207326 582 ntBASIC12.07□□□□□ -0.48
Col9a1Q05722 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC12.07□□□□□ -0.48
Col9a1Q05722 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a1Q05722 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC12.07□□□□□ -0.48
Col9a1Q05722 Gm18242-201ENSMUST00000218455 542 ntBASIC12.07□□□□□ -0.48
Col9a1Q05722 AC152169.1-201ENSMUST00000223901 701 ntBASIC12.07□□□□□ -0.48
Col9a1Q05722 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.07□□□□□ -0.48
Col9a1Q05722 AC123735.1-201ENSMUST00000227358 605 ntBASIC12.07□□□□□ -0.48
Col9a1Q05722 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a1Q05722 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a1Q05722 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a1Q05722 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a1Q05722 Gm5471-201ENSMUST00000072732 337 ntBASIC12.07□□□□□ -0.48
Col9a1Q05722 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Col9a1Q05722 Klri1-201ENSMUST00000088046 838 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a1Q05722 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms