Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.97□□□□□ -0.01
Smarcc1P97496 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcc1P97496 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC14.97□□□□□ -0.01
Smarcc1P97496 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC14.97□□□□□ -0.01
Smarcc1P97496 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcc1P97496 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC14.97□□□□□ -0.01
Smarcc1P97496 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcc1P97496 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC14.97□□□□□ -0.01
Smarcc1P97496 Gm45410-201ENSMUST00000211331 1093 ntBASIC14.97□□□□□ -0.01
Smarcc1P97496 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC14.97□□□□□ -0.01
Smarcc1P97496 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
Smarcc1P97496 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcc1P97496 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcc1P97496 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcc1P97496 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Smarcc1P97496 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcc1P97496 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcc1P97496 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcc1P97496 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcc1P97496 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcc1P97496 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcc1P97496 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcc1P97496 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.97□□□□□ -0.01
Smarcc1P97496 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcc1P97496 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcc1P97496 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcc1P97496 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcc1P97496 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcc1P97496 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Smarcc1P97496 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcc1P97496 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcc1P97496 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcc1P97496 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcc1P97496 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Smarcc1P97496 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcc1P97496 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
Smarcc1P97496 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC14.96□□□□□ -0.01
Smarcc1P97496 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC14.96□□□□□ -0.01
Smarcc1P97496 Gm8574-201ENSMUST00000203207 924 ntBASIC14.96□□□□□ -0.01
Smarcc1P97496 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcc1P97496 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Smarcc1P97496 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcc1P97496 Gm5805-201ENSMUST00000072779 456 ntBASIC14.96□□□□□ -0.01
Smarcc1P97496 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcc1P97496 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcc1P97496 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcc1P97496 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcc1P97496 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Smarcc1P97496 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcc1P97496 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Smarcc1P97496 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Smarcc1P97496 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Smarcc1P97496 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Smarcc1P97496 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Smarcc1P97496 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Smarcc1P97496 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC14.95□□□□□ -0.02
Smarcc1P97496 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcc1P97496 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcc1P97496 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC14.95□□□□□ -0.02
Smarcc1P97496 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcc1P97496 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcc1P97496 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcc1P97496 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcc1P97496 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Smarcc1P97496 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcc1P97496 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcc1P97496 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcc1P97496 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcc1P97496 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC14.95□□□□□ -0.02
Smarcc1P97496 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC14.95□□□□□ -0.02
Smarcc1P97496 Gm26134-201ENSMUST00000178484 110 ntBASIC14.95□□□□□ -0.02
Smarcc1P97496 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Smarcc1P97496 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcc1P97496 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC14.95□□□□□ -0.02
Smarcc1P97496 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcc1P97496 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcc1P97496 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcc1P97496 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcc1P97496 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcc1P97496 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Smarcc1P97496 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.95□□□□□ -0.02
Smarcc1P97496 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Smarcc1P97496 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC14.95□□□□□ -0.02
Smarcc1P97496 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Smarcc1P97496 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcc1P97496 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcc1P97496 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcc1P97496 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Smarcc1P97496 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Smarcc1P97496 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcc1P97496 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcc1P97496 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Smarcc1P97496 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcc1P97496 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcc1P97496 Gm6655-201ENSMUST00000201932 1309 ntBASIC14.94□□□□□ -0.02
Smarcc1P97496 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcc1P97496 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcc1P97496 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcc1P97496 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcc1P97496 Gm43447-201ENSMUST00000198471 1535 ntBASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms