Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SgcaP82350 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
SgcaP82350 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SgcaP82350 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
SgcaP82350 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.04□□□□□ -0.8
SgcaP82350 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
SgcaP82350 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SgcaP82350 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.04□□□□□ -0.8
SgcaP82350 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SgcaP82350 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
SgcaP82350 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SgcaP82350 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SgcaP82350 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SgcaP82350 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC10.03□□□□□ -0.8
SgcaP82350 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SgcaP82350 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SgcaP82350 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
SgcaP82350 Gm9466-201ENSMUST00000218144 2246 ntBASIC10.03□□□□□ -0.8
SgcaP82350 AC154352.1-201ENSMUST00000221477 2365 ntBASIC10.03□□□□□ -0.8
SgcaP82350 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC10.03□□□□□ -0.8
SgcaP82350 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
SgcaP82350 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SgcaP82350 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SgcaP82350 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SgcaP82350 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SgcaP82350 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SgcaP82350 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
SgcaP82350 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.03□□□□□ -0.8
SgcaP82350 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SgcaP82350 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SgcaP82350 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SgcaP82350 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SgcaP82350 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC10.03□□□□□ -0.8
SgcaP82350 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC10.03□□□□□ -0.8
SgcaP82350 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SgcaP82350 Gm12928-201ENSMUST00000117115 573 ntBASIC10.03□□□□□ -0.8
SgcaP82350 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
SgcaP82350 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC10.03□□□□□ -0.8
SgcaP82350 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC10.03□□□□□ -0.8
SgcaP82350 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC10.03□□□□□ -0.8
SgcaP82350 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
SgcaP82350 4632411P08Rik-201ENSMUST00000181005 3237 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SgcaP82350 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SgcaP82350 Gm28631-201ENSMUST00000190740 334 ntBASIC10.03□□□□□ -0.8
SgcaP82350 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SgcaP82350 Gm38671-201ENSMUST00000200573 130 ntBASIC10.03□□□□□ -0.8
SgcaP82350 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC10.03□□□□□ -0.8
SgcaP82350 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC10.03□□□□□ -0.8
SgcaP82350 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
SgcaP82350 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SgcaP82350 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SgcaP82350 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC10.03□□□□□ -0.8
SgcaP82350 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SgcaP82350 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
SgcaP82350 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
SgcaP82350 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SgcaP82350 Slc6a9-202ENSMUST00000063857 3146 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SgcaP82350 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
SgcaP82350 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SgcaP82350 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
SgcaP82350 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SgcaP82350 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SgcaP82350 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC10.03□□□□□ -0.8
SgcaP82350 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SgcaP82350 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
SgcaP82350 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SgcaP82350 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
SgcaP82350 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
SgcaP82350 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SgcaP82350 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SgcaP82350 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
SgcaP82350 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
SgcaP82350 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
SgcaP82350 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
SgcaP82350 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC10.02□□□□□ -0.8
SgcaP82350 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
SgcaP82350 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC10.02□□□□□ -0.8
SgcaP82350 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.8
SgcaP82350 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC10.02□□□□□ -0.8
SgcaP82350 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
SgcaP82350 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
SgcaP82350 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
SgcaP82350 Olfr71-203ENSMUST00000217544 2707 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
SgcaP82350 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
SgcaP82350 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SgcaP82350 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81
SgcaP82350 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
SgcaP82350 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SgcaP82350 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
SgcaP82350 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC10.02□□□□□ -0.81
SgcaP82350 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC10.02□□□□□ -0.81
SgcaP82350 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC10.02□□□□□ -0.81
SgcaP82350 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC10.02□□□□□ -0.81
SgcaP82350 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
SgcaP82350 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SgcaP82350 Gm44855-201ENSMUST00000205725 362 ntBASIC10.02□□□□□ -0.81
SgcaP82350 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SgcaP82350 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SgcaP82350 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC10.02□□□□□ -0.81
SgcaP82350 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms