Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm12997-201ENSMUST00000120207 640 ntBASIC10.73□□□□□ -0.69
SgcbP82349 Gm13263-201ENSMUST00000121271 838 ntBASIC10.73□□□□□ -0.69
SgcbP82349 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC10.73□□□□□ -0.69
SgcbP82349 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SgcbP82349 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.73□□□□□ -0.69
SgcbP82349 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SgcbP82349 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC10.73□□□□□ -0.69
SgcbP82349 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
SgcbP82349 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SgcbP82349 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SgcbP82349 Gm28071-201ENSMUST00000190355 478 ntBASIC10.73□□□□□ -0.69
SgcbP82349 Gm38134-201ENSMUST00000191858 1234 ntTSL 5 BASIC10.73□□□□□ -0.69
SgcbP82349 Ighv4-2-201ENSMUST00000192975 362 ntBASIC10.73□□□□□ -0.69
SgcbP82349 Gstp-ps-201ENSMUST00000195526 631 ntBASIC10.73□□□□□ -0.69
SgcbP82349 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.73□□□□□ -0.69
SgcbP82349 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SgcbP82349 AY036118-201ENSMUST00000200021 923 ntBASIC10.73□□□□□ -0.69
SgcbP82349 Gm45186-201ENSMUST00000206874 478 ntBASIC10.73□□□□□ -0.69
SgcbP82349 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SgcbP82349 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SgcbP82349 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SgcbP82349 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SgcbP82349 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SgcbP82349 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SgcbP82349 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SgcbP82349 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.73□□□□□ -0.69
SgcbP82349 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SgcbP82349 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SgcbP82349 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
SgcbP82349 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC10.73□□□□□ -0.69
SgcbP82349 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
SgcbP82349 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
SgcbP82349 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SgcbP82349 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SgcbP82349 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SgcbP82349 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC10.73□□□□□ -0.69
SgcbP82349 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
SgcbP82349 AC123619.2-202ENSMUST00000225097 1568 ntBASIC10.73□□□□□ -0.69
SgcbP82349 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
SgcbP82349 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SgcbP82349 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SgcbP82349 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC10.73□□□□□ -0.69
SgcbP82349 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
SgcbP82349 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SgcbP82349 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
SgcbP82349 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC10.72□□□□□ -0.69
SgcbP82349 Gm43463-201ENSMUST00000195967 1803 ntBASIC10.72□□□□□ -0.69
SgcbP82349 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.72□□□□□ -0.69
SgcbP82349 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC10.72□□□□□ -0.69
SgcbP82349 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
SgcbP82349 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
SgcbP82349 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SgcbP82349 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SgcbP82349 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SgcbP82349 Gm43677-201ENSMUST00000198098 2378 ntBASIC10.72□□□□□ -0.69
SgcbP82349 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SgcbP82349 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SgcbP82349 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
SgcbP82349 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
SgcbP82349 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
SgcbP82349 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
SgcbP82349 Gm15610-201ENSMUST00000120584 195 ntBASIC10.72□□□□□ -0.69
SgcbP82349 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SgcbP82349 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
SgcbP82349 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC10.72□□□□□ -0.69
SgcbP82349 Gm24749-201ENSMUST00000157838 343 ntBASIC10.72□□□□□ -0.69
SgcbP82349 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SgcbP82349 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
SgcbP82349 Ighv5-7-201ENSMUST00000192302 244 ntBASIC10.72□□□□□ -0.69
SgcbP82349 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC10.72□□□□□ -0.69
SgcbP82349 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC10.72□□□□□ -0.69
SgcbP82349 Gm17827-201ENSMUST00000211825 742 ntBASIC10.72□□□□□ -0.69
SgcbP82349 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC10.72□□□□□ -0.69
SgcbP82349 Olfr1248-201ENSMUST00000216129 1078 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
SgcbP82349 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.72□□□□□ -0.69
SgcbP82349 Gm18730-201ENSMUST00000218038 343 ntBASIC10.72□□□□□ -0.69
SgcbP82349 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC10.72□□□□□ -0.69
SgcbP82349 AC159205.5-202ENSMUST00000224849 386 ntBASIC10.72□□□□□ -0.69
SgcbP82349 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SgcbP82349 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SgcbP82349 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SgcbP82349 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
SgcbP82349 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SgcbP82349 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
SgcbP82349 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SgcbP82349 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SgcbP82349 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SgcbP82349 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
SgcbP82349 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
SgcbP82349 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SgcbP82349 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SgcbP82349 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SgcbP82349 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SgcbP82349 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
SgcbP82349 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
SgcbP82349 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
SgcbP82349 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SgcbP82349 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SgcbP82349 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SgcbP82349 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms