Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Six5P70178 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.22□□□□□ -0.61
Six5P70178 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Six5P70178 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Six5P70178 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Six5P70178 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Six5P70178 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Six5P70178 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Six5P70178 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Six5P70178 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Six5P70178 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Six5P70178 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.21□□□□□ -0.61
Six5P70178 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.21□□□□□ -0.61
Six5P70178 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Six5P70178 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.21□□□□□ -0.61
Six5P70178 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Six5P70178 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Six5P70178 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Six5P70178 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Six5P70178 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Six5P70178 Gm14130-201ENSMUST00000118417 987 ntBASIC11.21□□□□□ -0.61
Six5P70178 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.21□□□□□ -0.61
Six5P70178 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.21□□□□□ -0.61
Six5P70178 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Six5P70178 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.21□□□□□ -0.61
Six5P70178 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Six5P70178 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC11.21□□□□□ -0.61
Six5P70178 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.21□□□□□ -0.61
Six5P70178 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.21□□□□□ -0.61
Six5P70178 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Six5P70178 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Six5P70178 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Six5P70178 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Six5P70178 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Six5P70178 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Six5P70178 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Six5P70178 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Six5P70178 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Six5P70178 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Six5P70178 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Six5P70178 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.21□□□□□ -0.62
Six5P70178 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Six5P70178 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.62
Six5P70178 Map1b-203ENSMUST00000223725 2669 ntBASIC11.21□□□□□ -0.62
Six5P70178 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.21□□□□□ -0.62
Six5P70178 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Six5P70178 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.21□□□□□ -0.62
Six5P70178 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.62
Six5P70178 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Six5P70178 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.2□□□□□ -0.62
Six5P70178 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.2□□□□□ -0.62
Six5P70178 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Six5P70178 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Six5P70178 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Six5P70178 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Six5P70178 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Six5P70178 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Six5P70178 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.2□□□□□ -0.62
Six5P70178 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.2□□□□□ -0.62
Six5P70178 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Six5P70178 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Six5P70178 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Six5P70178 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Six5P70178 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Six5P70178 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Six5P70178 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Six5P70178 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Six5P70178 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Six5P70178 Gm22133-201ENSMUST00000102082 109 ntBASIC11.2□□□□□ -0.62
Six5P70178 Gm26286-201ENSMUST00000104166 134 ntBASIC11.2□□□□□ -0.62
Six5P70178 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Six5P70178 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Six5P70178 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Six5P70178 Gm13996-201ENSMUST00000118456 430 ntBASIC11.2□□□□□ -0.62
Six5P70178 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.2□□□□□ -0.62
Six5P70178 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Six5P70178 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.2□□□□□ -0.62
Six5P70178 Gm25700-201ENSMUST00000177693 110 ntBASIC11.2□□□□□ -0.62
Six5P70178 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.2□□□□□ -0.62
Six5P70178 AY036118-201ENSMUST00000200021 923 ntBASIC11.2□□□□□ -0.62
Six5P70178 Gm4607-201ENSMUST00000206649 577 ntBASIC11.2□□□□□ -0.62
Six5P70178 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Six5P70178 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.2□□□□□ -0.62
Six5P70178 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.2□□□□□ -0.62
Six5P70178 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Six5P70178 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Six5P70178 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Six5P70178 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Six5P70178 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Six5P70178 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Six5P70178 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Six5P70178 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.2□□□□□ -0.62
Six5P70178 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Six5P70178 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Six5P70178 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Six5P70178 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Six5P70178 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Six5P70178 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Six5P70178 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Six5P70178 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms