Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hmgb1P63158 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Hmgb1P63158 Gm11531-201ENSMUST00000117614 555 ntBASIC13.22□□□□□ -0.29
Hmgb1P63158 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.22□□□□□ -0.29
Hmgb1P63158 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hmgb1P63158 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC13.22□□□□□ -0.29
Hmgb1P63158 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hmgb1P63158 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC13.22□□□□□ -0.29
Hmgb1P63158 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC13.22□□□□□ -0.29
Hmgb1P63158 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.22□□□□□ -0.29
Hmgb1P63158 Gm37424-201ENSMUST00000191727 561 ntBASIC13.22□□□□□ -0.29
Hmgb1P63158 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.22□□□□□ -0.29
Hmgb1P63158 Gm19994-201ENSMUST00000217086 586 ntBASIC13.22□□□□□ -0.29
Hmgb1P63158 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.22□□□□□ -0.29
Hmgb1P63158 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hmgb1P63158 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.22□□□□□ -0.29
Hmgb1P63158 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC13.22□□□□□ -0.29
Hmgb1P63158 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hmgb1P63158 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hmgb1P63158 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Hmgb1P63158 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Hmgb1P63158 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hmgb1P63158 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC13.22□□□□□ -0.29
Hmgb1P63158 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Hmgb1P63158 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hmgb1P63158 Gm36814-201ENSMUST00000197457 1755 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hmgb1P63158 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hmgb1P63158 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hmgb1P63158 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hmgb1P63158 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hmgb1P63158 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hmgb1P63158 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hmgb1P63158 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.21□□□□□ -0.29
Hmgb1P63158 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Hmgb1P63158 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Hmgb1P63158 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Hmgb1P63158 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Hmgb1P63158 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hmgb1P63158 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hmgb1P63158 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hmgb1P63158 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hmgb1P63158 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hmgb1P63158 AC154639.1-201ENSMUST00000224393 2849 ntBASIC13.21□□□□□ -0.29
Hmgb1P63158 Gm4986-201ENSMUST00000119731 549 ntBASIC13.21□□□□□ -0.29
Hmgb1P63158 Gm11793-201ENSMUST00000120433 981 ntBASIC13.21□□□□□ -0.29
Hmgb1P63158 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Hmgb1P63158 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Hmgb1P63158 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC13.21□□□□□ -0.29
Hmgb1P63158 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.21□□□□□ -0.29
Hmgb1P63158 Gm43118-201ENSMUST00000199149 775 ntBASIC13.21□□□□□ -0.29
Hmgb1P63158 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Hmgb1P63158 Gm45880-201ENSMUST00000213041 853 ntBASIC13.21□□□□□ -0.29
Hmgb1P63158 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.21□□□□□ -0.29
Hmgb1P63158 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC13.21□□□□□ -0.29
Hmgb1P63158 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hmgb1P63158 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hmgb1P63158 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC13.21□□□□□ -0.29
Hmgb1P63158 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hmgb1P63158 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
Hmgb1P63158 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13.21□□□□□ -0.3
Hmgb1P63158 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Hmgb1P63158 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.3
Hmgb1P63158 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Hmgb1P63158 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Hmgb1P63158 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Hmgb1P63158 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.3
Hmgb1P63158 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC13.21□□□□□ -0.3
Hmgb1P63158 Gm8155-201ENSMUST00000216363 1612 ntBASIC13.21□□□□□ -0.3
Hmgb1P63158 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hmgb1P63158 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hmgb1P63158 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hmgb1P63158 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hmgb1P63158 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Hmgb1P63158 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC13.2□□□□□ -0.3
Hmgb1P63158 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hmgb1P63158 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Hmgb1P63158 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hmgb1P63158 Gm12201-201ENSMUST00000120657 1234 ntBASIC13.2□□□□□ -0.3
Hmgb1P63158 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hmgb1P63158 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hmgb1P63158 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hmgb1P63158 Gm37489-201ENSMUST00000191883 159 ntBASIC13.2□□□□□ -0.3
Hmgb1P63158 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hmgb1P63158 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC13.2□□□□□ -0.3
Hmgb1P63158 AC154252.2-201ENSMUST00000223593 767 ntBASIC13.2□□□□□ -0.3
Hmgb1P63158 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hmgb1P63158 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hmgb1P63158 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hmgb1P63158 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hmgb1P63158 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hmgb1P63158 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Hmgb1P63158 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hmgb1P63158 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hmgb1P63158 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.2□□□□□ -0.3
Hmgb1P63158 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hmgb1P63158 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Hmgb1P63158 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hmgb1P63158 Gm44152-201ENSMUST00000205007 1691 ntBASIC13.2□□□□□ -0.3
Hmgb1P63158 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hmgb1P63158 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms