Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Crnkl1P63154 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Crnkl1P63154 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Crnkl1P63154 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Crnkl1P63154 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Crnkl1P63154 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Crnkl1P63154 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Crnkl1P63154 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Crnkl1P63154 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC11.85□□□□□ -0.51
Crnkl1P63154 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Crnkl1P63154 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Crnkl1P63154 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Crnkl1P63154 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Crnkl1P63154 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.85□□□□□ -0.51
Crnkl1P63154 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC11.85□□□□□ -0.51
Crnkl1P63154 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.85□□□□□ -0.51
Crnkl1P63154 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Crnkl1P63154 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Crnkl1P63154 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Crnkl1P63154 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Crnkl1P63154 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Crnkl1P63154 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Crnkl1P63154 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.85□□□□□ -0.51
Crnkl1P63154 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.85□□□□□ -0.51
Crnkl1P63154 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Crnkl1P63154 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Crnkl1P63154 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.85□□□□□ -0.51
Crnkl1P63154 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Crnkl1P63154 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Crnkl1P63154 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.85□□□□□ -0.51
Crnkl1P63154 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Crnkl1P63154 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Crnkl1P63154 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Crnkl1P63154 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Crnkl1P63154 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Crnkl1P63154 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.85□□□□□ -0.51
Crnkl1P63154 Gm6458-201ENSMUST00000211573 635 ntBASIC11.85□□□□□ -0.51
Crnkl1P63154 Gm29705-201ENSMUST00000212598 474 ntBASIC11.85□□□□□ -0.51
Crnkl1P63154 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.85□□□□□ -0.51
Crnkl1P63154 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Crnkl1P63154 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Crnkl1P63154 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Crnkl1P63154 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Crnkl1P63154 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Crnkl1P63154 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Crnkl1P63154 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Crnkl1P63154 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.85□□□□□ -0.51
Crnkl1P63154 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.85□□□□□ -0.51
Crnkl1P63154 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Crnkl1P63154 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Crnkl1P63154 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Crnkl1P63154 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Crnkl1P63154 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Crnkl1P63154 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Crnkl1P63154 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Crnkl1P63154 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Crnkl1P63154 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Crnkl1P63154 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Crnkl1P63154 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.84□□□□□ -0.51
Crnkl1P63154 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Crnkl1P63154 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Crnkl1P63154 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Crnkl1P63154 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.84□□□□□ -0.51
Crnkl1P63154 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Crnkl1P63154 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Crnkl1P63154 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Crnkl1P63154 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Crnkl1P63154 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Crnkl1P63154 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Crnkl1P63154 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Crnkl1P63154 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.84□□□□□ -0.51
Crnkl1P63154 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.84□□□□□ -0.51
Crnkl1P63154 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Crnkl1P63154 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Crnkl1P63154 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Crnkl1P63154 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Crnkl1P63154 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.84□□□□□ -0.51
Crnkl1P63154 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Crnkl1P63154 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Crnkl1P63154 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.84□□□□□ -0.51
Crnkl1P63154 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Crnkl1P63154 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC11.84□□□□□ -0.51
Crnkl1P63154 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Crnkl1P63154 Gm27331-201ENSMUST00000183705 60 ntBASIC11.84□□□□□ -0.51
Crnkl1P63154 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Crnkl1P63154 Gm43818-201ENSMUST00000200605 466 ntBASIC11.84□□□□□ -0.51
Crnkl1P63154 Gm44882-201ENSMUST00000205702 802 ntBASIC11.84□□□□□ -0.51
Crnkl1P63154 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.84□□□□□ -0.51
Crnkl1P63154 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Crnkl1P63154 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Crnkl1P63154 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Crnkl1P63154 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Crnkl1P63154 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Crnkl1P63154 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Crnkl1P63154 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Crnkl1P63154 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Crnkl1P63154 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Crnkl1P63154 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Crnkl1P63154 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Crnkl1P63154 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms