Protein–RNA interactions for Protein: P61759

Vbp1, Prefoldin subunit 3, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vbp1P61759 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Vbp1P61759 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Vbp1P61759 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Vbp1P61759 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Vbp1P61759 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Vbp1P61759 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Vbp1P61759 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Vbp1P61759 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Vbp1P61759 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Vbp1P61759 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Vbp1P61759 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Vbp1P61759 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Vbp1P61759 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Vbp1P61759 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Vbp1P61759 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Vbp1P61759 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Vbp1P61759 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC10.83□□□□□ -0.68
Vbp1P61759 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Vbp1P61759 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Vbp1P61759 Gm37954-201ENSMUST00000195400 2071 ntBASIC10.83□□□□□ -0.68
Vbp1P61759 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Vbp1P61759 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vbp1P61759 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vbp1P61759 AC154171.2-201ENSMUST00000225219 2652 ntBASIC10.82□□□□□ -0.68
Vbp1P61759 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC10.82□□□□□ -0.68
Vbp1P61759 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Vbp1P61759 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Vbp1P61759 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vbp1P61759 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vbp1P61759 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vbp1P61759 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vbp1P61759 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vbp1P61759 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Vbp1P61759 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Vbp1P61759 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vbp1P61759 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Vbp1P61759 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Vbp1P61759 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Vbp1P61759 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Vbp1P61759 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vbp1P61759 Gm8805-201ENSMUST00000117848 313 ntBASIC10.82□□□□□ -0.68
Vbp1P61759 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vbp1P61759 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Vbp1P61759 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vbp1P61759 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Vbp1P61759 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Vbp1P61759 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC10.82□□□□□ -0.68
Vbp1P61759 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Vbp1P61759 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC10.82□□□□□ -0.68
Vbp1P61759 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Vbp1P61759 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vbp1P61759 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Vbp1P61759 Gm20445-201ENSMUST00000061905 565 ntBASIC10.82□□□□□ -0.68
Vbp1P61759 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC10.82□□□□□ -0.68
Vbp1P61759 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vbp1P61759 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vbp1P61759 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vbp1P61759 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vbp1P61759 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vbp1P61759 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC10.82□□□□□ -0.68
Vbp1P61759 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Vbp1P61759 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Vbp1P61759 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vbp1P61759 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC10.82□□□□□ -0.68
Vbp1P61759 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC10.82□□□□□ -0.68
Vbp1P61759 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.82□□□□□ -0.68
Vbp1P61759 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Vbp1P61759 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Vbp1P61759 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vbp1P61759 Gm14608-201ENSMUST00000120030 1553 ntBASIC10.82□□□□□ -0.68
Vbp1P61759 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vbp1P61759 Gm29358-202ENSMUST00000187941 3227 ntBASIC10.81□□□□□ -0.68
Vbp1P61759 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vbp1P61759 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Vbp1P61759 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Vbp1P61759 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vbp1P61759 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC10.81□□□□□ -0.68
Vbp1P61759 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vbp1P61759 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vbp1P61759 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC10.81□□□□□ -0.68
Vbp1P61759 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vbp1P61759 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vbp1P61759 Gm17208-201ENSMUST00000168388 535 ntBASIC10.81□□□□□ -0.68
Vbp1P61759 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Vbp1P61759 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC10.81□□□□□ -0.68
Vbp1P61759 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC10.81□□□□□ -0.68
Vbp1P61759 AC153974.2-201ENSMUST00000218577 1025 ntBASIC10.81□□□□□ -0.68
Vbp1P61759 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vbp1P61759 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC10.81□□□□□ -0.68
Vbp1P61759 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vbp1P61759 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vbp1P61759 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vbp1P61759 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Vbp1P61759 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vbp1P61759 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vbp1P61759 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Vbp1P61759 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vbp1P61759 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vbp1P61759 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Vbp1P61759 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 96.4 ms