Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a1P61620 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Sec61a1P61620 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a1P61620 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC10.58□□□□□ -0.72
Sec61a1P61620 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC10.58□□□□□ -0.72
Sec61a1P61620 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a1P61620 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a1P61620 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Sec61a1P61620 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Sec61a1P61620 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a1P61620 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a1P61620 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a1P61620 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.57□□□□□ -0.72
Sec61a1P61620 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a1P61620 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a1P61620 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a1P61620 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a1P61620 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a1P61620 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC10.57□□□□□ -0.72
Sec61a1P61620 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a1P61620 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a1P61620 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC10.57□□□□□ -0.72
Sec61a1P61620 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC10.57□□□□□ -0.72
Sec61a1P61620 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Sec61a1P61620 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a1P61620 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a1P61620 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a1P61620 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC10.57□□□□□ -0.72
Sec61a1P61620 Gm12241-201ENSMUST00000118330 726 ntBASIC10.57□□□□□ -0.72
Sec61a1P61620 Gm13316-201ENSMUST00000140537 691 ntBASIC10.57□□□□□ -0.72
Sec61a1P61620 Gm24548-201ENSMUST00000158650 108 ntBASIC10.57□□□□□ -0.72
Sec61a1P61620 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC10.57□□□□□ -0.72
Sec61a1P61620 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a1P61620 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a1P61620 Gm23363-201ENSMUST00000175024 79 ntBASIC10.57□□□□□ -0.72
Sec61a1P61620 Mospd4-201ENSMUST00000180618 576 ntBASIC10.57□□□□□ -0.72
Sec61a1P61620 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC10.57□□□□□ -0.72
Sec61a1P61620 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC10.57□□□□□ -0.72
Sec61a1P61620 Gm6621-201ENSMUST00000193251 772 ntBASIC10.57□□□□□ -0.72
Sec61a1P61620 Gm43758-201ENSMUST00000199500 367 ntBASIC10.57□□□□□ -0.72
Sec61a1P61620 Gm3961-201ENSMUST00000204425 994 ntBASIC10.57□□□□□ -0.72
Sec61a1P61620 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a1P61620 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Sec61a1P61620 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a1P61620 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a1P61620 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a1P61620 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Sec61a1P61620 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a1P61620 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a1P61620 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a1P61620 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a1P61620 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC10.57□□□□□ -0.72
Sec61a1P61620 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a1P61620 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a1P61620 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a1P61620 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC10.57□□□□□ -0.72
Sec61a1P61620 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a1P61620 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a1P61620 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a1P61620 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a1P61620 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.57□□□□□ -0.72
Sec61a1P61620 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a1P61620 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61a1P61620 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61a1P61620 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61a1P61620 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61a1P61620 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Sec61a1P61620 Gm8228-201ENSMUST00000189949 2192 ntBASIC10.56□□□□□ -0.72
Sec61a1P61620 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC10.56□□□□□ -0.72
Sec61a1P61620 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Sec61a1P61620 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61a1P61620 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61a1P61620 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61a1P61620 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Sec61a1P61620 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61a1P61620 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61a1P61620 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61a1P61620 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Sec61a1P61620 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61a1P61620 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Sec61a1P61620 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Sec61a1P61620 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Sec61a1P61620 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Sec61a1P61620 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Sec61a1P61620 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Sec61a1P61620 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
Sec61a1P61620 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61a1P61620 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61a1P61620 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61a1P61620 Gm4986-201ENSMUST00000119731 549 ntBASIC10.56□□□□□ -0.72
Sec61a1P61620 Gm13350-201ENSMUST00000120519 479 ntBASIC10.56□□□□□ -0.72
Sec61a1P61620 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sec61a1P61620 Gm5637-201ENSMUST00000153890 1119 ntBASIC10.56□□□□□ -0.72
Sec61a1P61620 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC10.56□□□□□ -0.72
Sec61a1P61620 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC10.56□□□□□ -0.72
Sec61a1P61620 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC10.56□□□□□ -0.72
Sec61a1P61620 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC10.56□□□□□ -0.72
Sec61a1P61620 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Sec61a1P61620 Gm8099-201ENSMUST00000200510 742 ntBASIC10.56□□□□□ -0.72
Sec61a1P61620 Gm44772-201ENSMUST00000207623 1191 ntBASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms