Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nup43P59235 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nup43P59235 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nup43P59235 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nup43P59235 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nup43P59235 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Nup43P59235 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nup43P59235 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nup43P59235 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nup43P59235 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nup43P59235 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nup43P59235 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nup43P59235 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Nup43P59235 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nup43P59235 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nup43P59235 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nup43P59235 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nup43P59235 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.31□□□□□ -0.6
Nup43P59235 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.31□□□□□ -0.6
Nup43P59235 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.31□□□□□ -0.6
Nup43P59235 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nup43P59235 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nup43P59235 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.31□□□□□ -0.6
Nup43P59235 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nup43P59235 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nup43P59235 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nup43P59235 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nup43P59235 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Nup43P59235 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nup43P59235 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.3□□□□□ -0.6
Nup43P59235 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nup43P59235 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nup43P59235 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.3□□□□□ -0.6
Nup43P59235 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nup43P59235 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nup43P59235 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nup43P59235 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nup43P59235 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.3□□□□□ -0.6
Nup43P59235 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.3□□□□□ -0.6
Nup43P59235 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Nup43P59235 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Nup43P59235 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nup43P59235 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.3□□□□□ -0.6
Nup43P59235 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nup43P59235 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.3□□□□□ -0.6
Nup43P59235 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Nup43P59235 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nup43P59235 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nup43P59235 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nup43P59235 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nup43P59235 Gm28071-201ENSMUST00000190355 478 ntBASIC11.3□□□□□ -0.6
Nup43P59235 Gm37666-201ENSMUST00000194110 866 ntBASIC11.3□□□□□ -0.6
Nup43P59235 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nup43P59235 Gm18056-201ENSMUST00000207670 568 ntBASIC11.3□□□□□ -0.6
Nup43P59235 Gm18061-201ENSMUST00000208350 562 ntBASIC11.3□□□□□ -0.6
Nup43P59235 Gm18063-201ENSMUST00000208529 568 ntBASIC11.3□□□□□ -0.6
Nup43P59235 Gm18052-201ENSMUST00000208750 559 ntBASIC11.3□□□□□ -0.6
Nup43P59235 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC11.3□□□□□ -0.6
Nup43P59235 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Nup43P59235 Gm6991-201ENSMUST00000218475 1178 ntBASIC11.3□□□□□ -0.6
Nup43P59235 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nup43P59235 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nup43P59235 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Nup43P59235 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nup43P59235 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nup43P59235 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.3□□□□□ -0.6
Nup43P59235 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nup43P59235 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nup43P59235 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.3□□□□□ -0.6
Nup43P59235 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nup43P59235 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nup43P59235 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.3□□□□□ -0.6
Nup43P59235 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nup43P59235 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nup43P59235 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nup43P59235 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Nup43P59235 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nup43P59235 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nup43P59235 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nup43P59235 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nup43P59235 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nup43P59235 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nup43P59235 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.29□□□□□ -0.6
Nup43P59235 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nup43P59235 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nup43P59235 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nup43P59235 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.29□□□□□ -0.6
Nup43P59235 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nup43P59235 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nup43P59235 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nup43P59235 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nup43P59235 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nup43P59235 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nup43P59235 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Nup43P59235 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nup43P59235 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.29□□□□□ -0.6
Nup43P59235 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nup43P59235 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.29□□□□□ -0.6
Nup43P59235 Gm2260-201ENSMUST00000184965 657 ntBASIC11.29□□□□□ -0.6
Nup43P59235 Gm37319-201ENSMUST00000193500 636 ntBASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms