Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SmoP56726 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SmoP56726 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SmoP56726 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SmoP56726 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.02□□□□□ -0.49
SmoP56726 Gm9062-201ENSMUST00000117712 727 ntBASIC12.02□□□□□ -0.49
SmoP56726 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.02□□□□□ -0.49
SmoP56726 Gm13045-201ENSMUST00000119019 712 ntBASIC12.02□□□□□ -0.49
SmoP56726 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.02□□□□□ -0.49
SmoP56726 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
SmoP56726 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.02□□□□□ -0.49
SmoP56726 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.02□□□□□ -0.49
SmoP56726 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SmoP56726 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SmoP56726 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
SmoP56726 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SmoP56726 Gm45575-201ENSMUST00000210283 548 ntBASIC12.02□□□□□ -0.49
SmoP56726 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SmoP56726 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
SmoP56726 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SmoP56726 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SmoP56726 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.02□□□□□ -0.49
SmoP56726 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
SmoP56726 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SmoP56726 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SmoP56726 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SmoP56726 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SmoP56726 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
SmoP56726 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SmoP56726 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SmoP56726 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.02□□□□□ -0.49
SmoP56726 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SmoP56726 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.02□□□□□ -0.49
SmoP56726 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SmoP56726 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SmoP56726 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
SmoP56726 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
SmoP56726 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.01□□□□□ -0.49
SmoP56726 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
SmoP56726 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SmoP56726 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.01□□□□□ -0.49
SmoP56726 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SmoP56726 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SmoP56726 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
SmoP56726 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SmoP56726 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SmoP56726 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SmoP56726 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SmoP56726 Gm12165-201ENSMUST00000117047 342 ntBASIC12.01□□□□□ -0.49
SmoP56726 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SmoP56726 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
SmoP56726 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.01□□□□□ -0.49
SmoP56726 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SmoP56726 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.01□□□□□ -0.49
SmoP56726 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.01□□□□□ -0.49
SmoP56726 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SmoP56726 Gm19353-201ENSMUST00000184561 445 ntBASIC12.01□□□□□ -0.49
SmoP56726 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.01□□□□□ -0.49
SmoP56726 Gm38117-201ENSMUST00000194653 939 ntBASIC12.01□□□□□ -0.49
SmoP56726 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.01□□□□□ -0.49
SmoP56726 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SmoP56726 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.01□□□□□ -0.49
SmoP56726 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
SmoP56726 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.01□□□□□ -0.49
SmoP56726 Gm1821-202ENSMUST00000227415 750 ntBASIC12.01□□□□□ -0.49
SmoP56726 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SmoP56726 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SmoP56726 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SmoP56726 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SmoP56726 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.01□□□□□ -0.49
SmoP56726 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SmoP56726 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SmoP56726 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SmoP56726 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.01□□□□□ -0.49
SmoP56726 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SmoP56726 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
SmoP56726 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SmoP56726 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SmoP56726 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
SmoP56726 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12□□□□□ -0.49
SmoP56726 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12□□□□□ -0.49
SmoP56726 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
SmoP56726 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12□□□□□ -0.49
SmoP56726 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12□□□□□ -0.49
SmoP56726 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12□□□□□ -0.49
SmoP56726 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SmoP56726 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12□□□□□ -0.49
SmoP56726 Gm15207-201ENSMUST00000119259 442 ntBASIC12□□□□□ -0.49
SmoP56726 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
SmoP56726 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC12□□□□□ -0.49
SmoP56726 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12□□□□□ -0.49
SmoP56726 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12□□□□□ -0.49
SmoP56726 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12□□□□□ -0.49
SmoP56726 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12□□□□□ -0.49
SmoP56726 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SmoP56726 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12□□□□□ -0.49
SmoP56726 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12□□□□□ -0.49
SmoP56726 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SmoP56726 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SmoP56726 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms