Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rrp1P56183 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rrp1P56183 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rrp1P56183 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.48□□□□□ -0.25
Rrp1P56183 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rrp1P56183 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC13.48□□□□□ -0.25
Rrp1P56183 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC13.48□□□□□ -0.25
Rrp1P56183 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Rrp1P56183 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Rrp1P56183 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rrp1P56183 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rrp1P56183 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rrp1P56183 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rrp1P56183 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rrp1P56183 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Rrp1P56183 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rrp1P56183 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rrp1P56183 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rrp1P56183 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.48□□□□□ -0.25
Rrp1P56183 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.48□□□□□ -0.25
Rrp1P56183 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rrp1P56183 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rrp1P56183 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rrp1P56183 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Rrp1P56183 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rrp1P56183 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Rrp1P56183 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rrp1P56183 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.48□□□□□ -0.25
Rrp1P56183 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC13.48□□□□□ -0.25
Rrp1P56183 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rrp1P56183 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rrp1P56183 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rrp1P56183 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rrp1P56183 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rrp1P56183 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rrp1P56183 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rrp1P56183 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Rrp1P56183 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rrp1P56183 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rrp1P56183 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rrp1P56183 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Rrp1P56183 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
Rrp1P56183 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rrp1P56183 Mir1247-201ENSMUST00000116706 82 ntBASIC13.47□□□□□ -0.25
Rrp1P56183 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC13.47□□□□□ -0.25
Rrp1P56183 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rrp1P56183 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
Rrp1P56183 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rrp1P56183 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.47□□□□□ -0.25
Rrp1P56183 Gm42627-201ENSMUST00000197347 224 ntBASIC13.47□□□□□ -0.25
Rrp1P56183 Gm43002-201ENSMUST00000200310 155 ntBASIC13.47□□□□□ -0.25
Rrp1P56183 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rrp1P56183 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rrp1P56183 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rrp1P56183 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rrp1P56183 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rrp1P56183 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rrp1P56183 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rrp1P56183 Gm37348-201ENSMUST00000193104 1789 ntBASIC13.47□□□□□ -0.25
Rrp1P56183 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rrp1P56183 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rrp1P56183 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rrp1P56183 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Rrp1P56183 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rrp1P56183 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Rrp1P56183 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rrp1P56183 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rrp1P56183 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rrp1P56183 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rrp1P56183 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rrp1P56183 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rrp1P56183 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rrp1P56183 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC13.46□□□□□ -0.25
Rrp1P56183 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rrp1P56183 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rrp1P56183 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Rrp1P56183 Gm36987-201ENSMUST00000194704 2979 ntBASIC13.46□□□□□ -0.25
Rrp1P56183 Gm45496-201ENSMUST00000209918 2917 ntBASIC13.46□□□□□ -0.25
Rrp1P56183 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Rrp1P56183 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Rrp1P56183 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rrp1P56183 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rrp1P56183 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.46□□□□□ -0.25
Rrp1P56183 Gm13392-201ENSMUST00000117708 150 ntBASIC13.46□□□□□ -0.25
Rrp1P56183 Gm5419-201ENSMUST00000119301 527 ntBASIC13.46□□□□□ -0.25
Rrp1P56183 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Rrp1P56183 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rrp1P56183 Gm45880-201ENSMUST00000213041 853 ntBASIC13.46□□□□□ -0.25
Rrp1P56183 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.46□□□□□ -0.25
Rrp1P56183 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.46□□□□□ -0.25
Rrp1P56183 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rrp1P56183 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rrp1P56183 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rrp1P56183 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rrp1P56183 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rrp1P56183 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Rrp1P56183 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rrp1P56183 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC13.46□□□□□ -0.25
Rrp1P56183 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rrp1P56183 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms