Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.94□□□□□ -0.34
Nub1P54729 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nub1P54729 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.94□□□□□ -0.34
Nub1P54729 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nub1P54729 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.94□□□□□ -0.34
Nub1P54729 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Nub1P54729 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Nub1P54729 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nub1P54729 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nub1P54729 Gm43375-201ENSMUST00000196705 2480 ntBASIC12.94□□□□□ -0.34
Nub1P54729 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.94□□□□□ -0.34
Nub1P54729 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nub1P54729 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nub1P54729 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nub1P54729 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nub1P54729 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nub1P54729 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Nub1P54729 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nub1P54729 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nub1P54729 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nub1P54729 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nub1P54729 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nub1P54729 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Nub1P54729 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nub1P54729 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Nub1P54729 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nub1P54729 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nub1P54729 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nub1P54729 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Nub1P54729 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nub1P54729 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nub1P54729 Gm13296-201ENSMUST00000117854 997 ntBASIC12.93□□□□□ -0.34
Nub1P54729 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.93□□□□□ -0.34
Nub1P54729 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.93□□□□□ -0.34
Nub1P54729 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.93□□□□□ -0.34
Nub1P54729 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.93□□□□□ -0.34
Nub1P54729 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.93□□□□□ -0.34
Nub1P54729 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.93□□□□□ -0.34
Nub1P54729 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.93□□□□□ -0.34
Nub1P54729 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
Nub1P54729 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nub1P54729 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nub1P54729 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nub1P54729 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Nub1P54729 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nub1P54729 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nub1P54729 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nub1P54729 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nub1P54729 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nub1P54729 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nub1P54729 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Nub1P54729 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Nub1P54729 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Nub1P54729 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nub1P54729 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nub1P54729 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Nub1P54729 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nub1P54729 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Nub1P54729 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nub1P54729 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nub1P54729 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nub1P54729 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nub1P54729 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.92□□□□□ -0.34
Nub1P54729 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.92□□□□□ -0.34
Nub1P54729 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.92□□□□□ -0.34
Nub1P54729 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nub1P54729 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nub1P54729 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Nub1P54729 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nub1P54729 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Nub1P54729 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nub1P54729 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nub1P54729 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nub1P54729 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.92□□□□□ -0.34
Nub1P54729 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.92□□□□□ -0.34
Nub1P54729 Gm36991-201ENSMUST00000191800 648 ntBASIC12.92□□□□□ -0.34
Nub1P54729 Gm4857-201ENSMUST00000192718 785 ntBASIC12.92□□□□□ -0.34
Nub1P54729 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nub1P54729 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Nub1P54729 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.92□□□□□ -0.34
Nub1P54729 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.92□□□□□ -0.34
Nub1P54729 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nub1P54729 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nub1P54729 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nub1P54729 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nub1P54729 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nub1P54729 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nub1P54729 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.92□□□□□ -0.34
Nub1P54729 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nub1P54729 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nub1P54729 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nub1P54729 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nub1P54729 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nub1P54729 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nub1P54729 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.92□□□□□ -0.34
Nub1P54729 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nub1P54729 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nub1P54729 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nub1P54729 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.92□□□□□ -0.34
Nub1P54729 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms