Protein–RNA interactions for Protein: P50586

Tub, Tubby protein, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TubP50586 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TubP50586 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.28□□□□□ -0.44
TubP50586 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TubP50586 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TubP50586 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
TubP50586 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TubP50586 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
TubP50586 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.28□□□□□ -0.44
TubP50586 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TubP50586 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TubP50586 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TubP50586 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TubP50586 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TubP50586 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
TubP50586 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TubP50586 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
TubP50586 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TubP50586 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TubP50586 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.28□□□□□ -0.44
TubP50586 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TubP50586 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TubP50586 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.27□□□□□ -0.44
TubP50586 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.27□□□□□ -0.44
TubP50586 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
TubP50586 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
TubP50586 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
TubP50586 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
TubP50586 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
TubP50586 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TubP50586 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
TubP50586 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
TubP50586 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TubP50586 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TubP50586 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.27□□□□□ -0.45
TubP50586 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
TubP50586 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TubP50586 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
TubP50586 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.27□□□□□ -0.45
TubP50586 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TubP50586 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TubP50586 Gm18038-201ENSMUST00000197900 485 ntBASIC12.27□□□□□ -0.45
TubP50586 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.27□□□□□ -0.45
TubP50586 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TubP50586 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.27□□□□□ -0.45
TubP50586 Gm18730-201ENSMUST00000218038 343 ntBASIC12.27□□□□□ -0.45
TubP50586 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.27□□□□□ -0.45
TubP50586 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.27□□□□□ -0.45
TubP50586 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TubP50586 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TubP50586 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.27□□□□□ -0.45
TubP50586 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
TubP50586 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TubP50586 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TubP50586 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
TubP50586 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TubP50586 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TubP50586 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.27□□□□□ -0.45
TubP50586 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TubP50586 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TubP50586 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TubP50586 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TubP50586 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.27□□□□□ -0.45
TubP50586 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.27□□□□□ -0.45
TubP50586 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
TubP50586 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
TubP50586 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
TubP50586 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
TubP50586 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.26□□□□□ -0.45
TubP50586 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.26□□□□□ -0.45
TubP50586 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TubP50586 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TubP50586 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TubP50586 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.26□□□□□ -0.45
TubP50586 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TubP50586 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TubP50586 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TubP50586 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TubP50586 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TubP50586 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TubP50586 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TubP50586 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TubP50586 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.26□□□□□ -0.45
TubP50586 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
TubP50586 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
TubP50586 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.26□□□□□ -0.45
TubP50586 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.26□□□□□ -0.45
TubP50586 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TubP50586 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TubP50586 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.26□□□□□ -0.45
TubP50586 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TubP50586 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
TubP50586 Mir7677-201ENSMUST00000184226 67 ntBASIC12.26□□□□□ -0.45
TubP50586 Gm43184-201ENSMUST00000197247 542 ntBASIC12.26□□□□□ -0.45
TubP50586 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.26□□□□□ -0.45
TubP50586 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
TubP50586 Gm4157-201ENSMUST00000211647 679 ntBASIC12.26□□□□□ -0.45
TubP50586 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.26□□□□□ -0.45
TubP50586 Gm270-201ENSMUST00000223010 976 ntBASIC12.26□□□□□ -0.45
TubP50586 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TubP50586 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms