Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lhx3P50481 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lhx3P50481 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lhx3P50481 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lhx3P50481 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lhx3P50481 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.1□□□□□ -0.47
Lhx3P50481 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lhx3P50481 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lhx3P50481 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.1□□□□□ -0.47
Lhx3P50481 Gm23251-201ENSMUST00000103773 110 ntBASIC12.1□□□□□ -0.47
Lhx3P50481 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.1□□□□□ -0.47
Lhx3P50481 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.1□□□□□ -0.47
Lhx3P50481 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.1□□□□□ -0.47
Lhx3P50481 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.1□□□□□ -0.47
Lhx3P50481 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lhx3P50481 Gm8815-201ENSMUST00000173809 620 ntBASIC12.1□□□□□ -0.47
Lhx3P50481 Gm28937-201ENSMUST00000185413 695 ntBASIC12.1□□□□□ -0.47
Lhx3P50481 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.1□□□□□ -0.47
Lhx3P50481 Gm29400-201ENSMUST00000187208 695 ntBASIC12.1□□□□□ -0.47
Lhx3P50481 Gm28662-201ENSMUST00000188446 695 ntBASIC12.1□□□□□ -0.47
Lhx3P50481 Gm28251-201ENSMUST00000188835 695 ntBASIC12.1□□□□□ -0.47
Lhx3P50481 Gm37318-201ENSMUST00000194325 695 ntBASIC12.1□□□□□ -0.47
Lhx3P50481 Gm38017-201ENSMUST00000194768 695 ntBASIC12.1□□□□□ -0.47
Lhx3P50481 Gm37287-201ENSMUST00000195449 695 ntBASIC12.1□□□□□ -0.47
Lhx3P50481 Gm37793-201ENSMUST00000195548 695 ntBASIC12.1□□□□□ -0.47
Lhx3P50481 Gm5714-201ENSMUST00000197343 566 ntBASIC12.1□□□□□ -0.47
Lhx3P50481 Gm9555-201ENSMUST00000200908 583 ntBASIC12.1□□□□□ -0.47
Lhx3P50481 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.1□□□□□ -0.47
Lhx3P50481 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Lhx3P50481 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.1□□□□□ -0.47
Lhx3P50481 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.1□□□□□ -0.47
Lhx3P50481 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Lhx3P50481 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.1□□□□□ -0.47
Lhx3P50481 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lhx3P50481 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Lhx3P50481 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lhx3P50481 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lhx3P50481 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.1□□□□□ -0.47
Lhx3P50481 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lhx3P50481 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lhx3P50481 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lhx3P50481 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lhx3P50481 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lhx3P50481 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lhx3P50481 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lhx3P50481 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Lhx3P50481 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx3P50481 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx3P50481 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx3P50481 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx3P50481 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx3P50481 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx3P50481 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx3P50481 Gm24891-201ENSMUST00000104391 136 ntBASIC12.09□□□□□ -0.47
Lhx3P50481 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC12.09□□□□□ -0.47
Lhx3P50481 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.09□□□□□ -0.47
Lhx3P50481 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.09□□□□□ -0.47
Lhx3P50481 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Lhx3P50481 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx3P50481 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.09□□□□□ -0.47
Lhx3P50481 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.09□□□□□ -0.47
Lhx3P50481 Gm6867-201ENSMUST00000219165 425 ntBASIC12.09□□□□□ -0.47
Lhx3P50481 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.09□□□□□ -0.47
Lhx3P50481 Abhd11os-203ENSMUST00000222613 363 ntBASIC12.09□□□□□ -0.47
Lhx3P50481 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx3P50481 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx3P50481 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx3P50481 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx3P50481 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx3P50481 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.09□□□□□ -0.47
Lhx3P50481 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx3P50481 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx3P50481 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Lhx3P50481 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.09□□□□□ -0.47
Lhx3P50481 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx3P50481 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx3P50481 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Lhx3P50481 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx3P50481 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx3P50481 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx3P50481 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx3P50481 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx3P50481 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx3P50481 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lhx3P50481 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Lhx3P50481 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.08□□□□□ -0.47
Lhx3P50481 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Lhx3P50481 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Lhx3P50481 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Lhx3P50481 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.08□□□□□ -0.48
Lhx3P50481 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lhx3P50481 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.08□□□□□ -0.48
Lhx3P50481 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lhx3P50481 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.08□□□□□ -0.48
Lhx3P50481 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lhx3P50481 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.08□□□□□ -0.48
Lhx3P50481 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lhx3P50481 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lhx3P50481 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Lhx3P50481 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms