Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm5523-201ENSMUST00000180415 997 ntBASIC12.65□□□□□ -0.38
Shmt1P50431 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.65□□□□□ -0.38
Shmt1P50431 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.65□□□□□ -0.38
Shmt1P50431 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.65□□□□□ -0.38
Shmt1P50431 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Shmt1P50431 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Shmt1P50431 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shmt1P50431 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Shmt1P50431 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.65□□□□□ -0.38
Shmt1P50431 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shmt1P50431 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shmt1P50431 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Shmt1P50431 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shmt1P50431 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shmt1P50431 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shmt1P50431 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Shmt1P50431 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shmt1P50431 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shmt1P50431 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.65□□□□□ -0.39
Shmt1P50431 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shmt1P50431 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.64□□□□□ -0.39
Shmt1P50431 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shmt1P50431 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shmt1P50431 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shmt1P50431 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shmt1P50431 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shmt1P50431 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.64□□□□□ -0.39
Shmt1P50431 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Shmt1P50431 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Shmt1P50431 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Shmt1P50431 Gm14058-201ENSMUST00000116082 735 ntBASIC12.64□□□□□ -0.39
Shmt1P50431 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shmt1P50431 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Shmt1P50431 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Shmt1P50431 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.64□□□□□ -0.39
Shmt1P50431 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.64□□□□□ -0.39
Shmt1P50431 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Shmt1P50431 Gm9555-201ENSMUST00000200908 583 ntBASIC12.64□□□□□ -0.39
Shmt1P50431 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.64□□□□□ -0.39
Shmt1P50431 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.64□□□□□ -0.39
Shmt1P50431 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.64□□□□□ -0.39
Shmt1P50431 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Shmt1P50431 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shmt1P50431 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shmt1P50431 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shmt1P50431 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.64□□□□□ -0.39
Shmt1P50431 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shmt1P50431 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Shmt1P50431 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.64□□□□□ -0.39
Shmt1P50431 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Shmt1P50431 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.64□□□□□ -0.39
Shmt1P50431 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Shmt1P50431 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shmt1P50431 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.64□□□□□ -0.39
Shmt1P50431 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Shmt1P50431 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Shmt1P50431 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shmt1P50431 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shmt1P50431 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shmt1P50431 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.64□□□□□ -0.39
Shmt1P50431 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shmt1P50431 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shmt1P50431 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shmt1P50431 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Shmt1P50431 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shmt1P50431 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.63□□□□□ -0.39
Shmt1P50431 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shmt1P50431 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shmt1P50431 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shmt1P50431 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shmt1P50431 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shmt1P50431 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Shmt1P50431 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.63□□□□□ -0.39
Shmt1P50431 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Shmt1P50431 Gm12501-201ENSMUST00000119163 529 ntBASIC12.63□□□□□ -0.39
Shmt1P50431 Gm8566-201ENSMUST00000120174 465 ntBASIC12.63□□□□□ -0.39
Shmt1P50431 Gm11660-201ENSMUST00000120955 412 ntBASIC12.63□□□□□ -0.39
Shmt1P50431 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.63□□□□□ -0.39
Shmt1P50431 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.63□□□□□ -0.39
Shmt1P50431 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shmt1P50431 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Shmt1P50431 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Shmt1P50431 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Shmt1P50431 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.63□□□□□ -0.39
Shmt1P50431 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Shmt1P50431 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Shmt1P50431 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shmt1P50431 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shmt1P50431 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Shmt1P50431 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shmt1P50431 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.63□□□□□ -0.39
Shmt1P50431 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shmt1P50431 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.63□□□□□ -0.39
Shmt1P50431 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shmt1P50431 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shmt1P50431 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shmt1P50431 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Shmt1P50431 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Shmt1P50431 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.62□□□□□ -0.39
Shmt1P50431 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 113 ms