Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Nkx2-1P50220 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Nkx2-1P50220 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Nkx2-1P50220 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Nkx2-1P50220 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Nkx2-1P50220 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Nkx2-1P50220 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Nkx2-1P50220 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Nkx2-1P50220 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Nkx2-1P50220 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Nkx2-1P50220 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Nkx2-1P50220 BC043934-202ENSMUST00000185694 2356 ntBASIC9.9□□□□□ -0.82
Nkx2-1P50220 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC9.9□□□□□ -0.82
Nkx2-1P50220 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Nkx2-1P50220 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nkx2-1P50220 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC9.9□□□□□ -0.82
Nkx2-1P50220 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nkx2-1P50220 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Nkx2-1P50220 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nkx2-1P50220 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
Nkx2-1P50220 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC9.9□□□□□ -0.82
Nkx2-1P50220 Gm13050-201ENSMUST00000122149 1345 ntBASIC9.9□□□□□ -0.82
Nkx2-1P50220 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC9.9□□□□□ -0.82
Nkx2-1P50220 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Nkx2-1P50220 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nkx2-1P50220 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nkx2-1P50220 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Nkx2-1P50220 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nkx2-1P50220 Gm13369-201ENSMUST00000119442 987 ntBASIC9.9□□□□□ -0.82
Nkx2-1P50220 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC9.9□□□□□ -0.82
Nkx2-1P50220 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Nkx2-1P50220 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Nkx2-1P50220 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC9.9□□□□□ -0.82
Nkx2-1P50220 Gm44958-201ENSMUST00000203734 736 ntBASIC9.9□□□□□ -0.82
Nkx2-1P50220 Gm44799-201ENSMUST00000207639 1202 ntBASIC9.9□□□□□ -0.82
Nkx2-1P50220 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC9.9□□□□□ -0.82
Nkx2-1P50220 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nkx2-1P50220 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nkx2-1P50220 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Nkx2-1P50220 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Nkx2-1P50220 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Nkx2-1P50220 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nkx2-1P50220 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nkx2-1P50220 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nkx2-1P50220 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nkx2-1P50220 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nkx2-1P50220 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nkx2-1P50220 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nkx2-1P50220 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Nkx2-1P50220 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Nkx2-1P50220 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
Nkx2-1P50220 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
Nkx2-1P50220 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
Nkx2-1P50220 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Nkx2-1P50220 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC9.9□□□□□ -0.83
Nkx2-1P50220 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC9.9□□□□□ -0.83
Nkx2-1P50220 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Nkx2-1P50220 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nkx2-1P50220 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nkx2-1P50220 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nkx2-1P50220 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nkx2-1P50220 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Nkx2-1P50220 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nkx2-1P50220 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Nkx2-1P50220 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Nkx2-1P50220 AC211878.3-201ENSMUST00000222629 2018 ntBASIC9.89□□□□□ -0.83
Nkx2-1P50220 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nkx2-1P50220 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC9.89□□□□□ -0.83
Nkx2-1P50220 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nkx2-1P50220 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC9.89□□□□□ -0.83
Nkx2-1P50220 Gm24830-201ENSMUST00000102024 166 ntBASIC9.89□□□□□ -0.83
Nkx2-1P50220 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC9.89□□□□□ -0.83
Nkx2-1P50220 Gm12203-201ENSMUST00000118235 598 ntBASIC9.89□□□□□ -0.83
Nkx2-1P50220 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC9.89□□□□□ -0.83
Nkx2-1P50220 Gm12209-201ENSMUST00000120089 596 ntBASIC9.89□□□□□ -0.83
Nkx2-1P50220 Gm13315-201ENSMUST00000120376 991 ntBASIC9.89□□□□□ -0.83
Nkx2-1P50220 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nkx2-1P50220 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC9.89□□□□□ -0.83
Nkx2-1P50220 Gm5637-201ENSMUST00000153890 1119 ntBASIC9.89□□□□□ -0.83
Nkx2-1P50220 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nkx2-1P50220 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nkx2-1P50220 Gm8652-201ENSMUST00000181363 964 ntBASIC9.89□□□□□ -0.83
Nkx2-1P50220 Gm27847-201ENSMUST00000183711 107 ntBASIC9.89□□□□□ -0.83
Nkx2-1P50220 Gm27375-201ENSMUST00000183799 107 ntBASIC9.89□□□□□ -0.83
Nkx2-1P50220 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC9.89□□□□□ -0.83
Nkx2-1P50220 Gm7067-201ENSMUST00000207698 1249 ntBASIC9.89□□□□□ -0.83
Nkx2-1P50220 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC9.89□□□□□ -0.83
Nkx2-1P50220 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC9.89□□□□□ -0.83
Nkx2-1P50220 AC153929.1-201ENSMUST00000219009 303 ntBASIC9.89□□□□□ -0.83
Nkx2-1P50220 AC108416.1-202ENSMUST00000228927 1201 ntBASIC9.89□□□□□ -0.83
Nkx2-1P50220 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nkx2-1P50220 Gm10146-201ENSMUST00000072739 309 ntBASIC9.89□□□□□ -0.83
Nkx2-1P50220 Gm26232-201ENSMUST00000083360 166 ntBASIC9.89□□□□□ -0.83
Nkx2-1P50220 Rnu1b6-201ENSMUST00000083839 166 ntBASIC9.89□□□□□ -0.83
Nkx2-1P50220 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nkx2-1P50220 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Nkx2-1P50220 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nkx2-1P50220 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nkx2-1P50220 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Nkx2-1P50220 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC9.89□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms