Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox2P48432 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox2P48432 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sox2P48432 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sox2P48432 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox2P48432 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox2P48432 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sox2P48432 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Sox2P48432 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Sox2P48432 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox2P48432 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox2P48432 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox2P48432 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox2P48432 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.18□□□□□ -0.62
Sox2P48432 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.18□□□□□ -0.62
Sox2P48432 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Sox2P48432 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sox2P48432 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox2P48432 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox2P48432 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox2P48432 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Sox2P48432 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.18□□□□□ -0.62
Sox2P48432 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.18□□□□□ -0.62
Sox2P48432 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Sox2P48432 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
Sox2P48432 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox2P48432 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sox2P48432 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.18□□□□□ -0.62
Sox2P48432 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox2P48432 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sox2P48432 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sox2P48432 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.18□□□□□ -0.62
Sox2P48432 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sox2P48432 Gm11591-201ENSMUST00000120063 702 ntBASIC11.18□□□□□ -0.62
Sox2P48432 Gm15806-201ENSMUST00000120696 955 ntBASIC11.18□□□□□ -0.62
Sox2P48432 Gm14999-201ENSMUST00000121039 624 ntBASIC11.18□□□□□ -0.62
Sox2P48432 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.18□□□□□ -0.62
Sox2P48432 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sox2P48432 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox2P48432 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sox2P48432 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sox2P48432 Gm29649-201ENSMUST00000185649 419 ntBASIC11.18□□□□□ -0.62
Sox2P48432 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.18□□□□□ -0.62
Sox2P48432 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox2P48432 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox2P48432 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox2P48432 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.18□□□□□ -0.62
Sox2P48432 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.18□□□□□ -0.62
Sox2P48432 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.18□□□□□ -0.62
Sox2P48432 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sox2P48432 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox2P48432 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sox2P48432 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox2P48432 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox2P48432 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.18□□□□□ -0.62
Sox2P48432 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sox2P48432 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox2P48432 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox2P48432 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox2P48432 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox2P48432 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sox2P48432 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
Sox2P48432 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox2P48432 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sox2P48432 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox2P48432 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox2P48432 Rgr-203ENSMUST00000225070 4704 ntBASIC11.17□□□□□ -0.62
Sox2P48432 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox2P48432 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox2P48432 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox2P48432 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Sox2P48432 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Sox2P48432 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox2P48432 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox2P48432 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox2P48432 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.17□□□□□ -0.62
Sox2P48432 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.17□□□□□ -0.62
Sox2P48432 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Sox2P48432 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sox2P48432 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.17□□□□□ -0.62
Sox2P48432 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox2P48432 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Sox2P48432 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.17□□□□□ -0.62
Sox2P48432 Gm16177-201ENSMUST00000120728 718 ntBASIC11.17□□□□□ -0.62
Sox2P48432 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sox2P48432 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sox2P48432 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.17□□□□□ -0.62
Sox2P48432 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sox2P48432 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.17□□□□□ -0.62
Sox2P48432 Gm6222-202ENSMUST00000182143 629 ntBASIC11.17□□□□□ -0.62
Sox2P48432 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sox2P48432 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.17□□□□□ -0.62
Sox2P48432 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sox2P48432 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox2P48432 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox2P48432 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox2P48432 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Sox2P48432 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sox2P48432 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.17□□□□□ -0.62
Sox2P48432 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms