Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
TgfaP48030 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
TgfaP48030 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
TgfaP48030 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
TgfaP48030 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
TgfaP48030 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
TgfaP48030 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
TgfaP48030 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
TgfaP48030 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
TgfaP48030 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
TgfaP48030 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
TgfaP48030 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
TgfaP48030 Gm36970-201ENSMUST00000193688 1859 ntBASIC10.42□□□□□ -0.74
TgfaP48030 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
TgfaP48030 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
TgfaP48030 AC126257.1-201ENSMUST00000213195 1536 ntBASIC10.42□□□□□ -0.74
TgfaP48030 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
TgfaP48030 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
TgfaP48030 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
TgfaP48030 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
TgfaP48030 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
TgfaP48030 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
TgfaP48030 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.42□□□□□ -0.74
TgfaP48030 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
TgfaP48030 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC10.42□□□□□ -0.74
TgfaP48030 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
TgfaP48030 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
TgfaP48030 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
TgfaP48030 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
TgfaP48030 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
TgfaP48030 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
TgfaP48030 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
TgfaP48030 Gm10652-201ENSMUST00000199790 2622 ntBASIC10.41□□□□□ -0.74
TgfaP48030 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
TgfaP48030 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
TgfaP48030 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
TgfaP48030 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
TgfaP48030 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
TgfaP48030 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
TgfaP48030 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
TgfaP48030 AC129931.1-201ENSMUST00000228865 1861 ntBASIC10.41□□□□□ -0.74
TgfaP48030 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
TgfaP48030 Gm14942-201ENSMUST00000119642 336 ntBASIC10.41□□□□□ -0.74
TgfaP48030 Gm15610-201ENSMUST00000120584 195 ntBASIC10.41□□□□□ -0.74
TgfaP48030 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
TgfaP48030 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC10.41□□□□□ -0.74
TgfaP48030 Gm4310-201ENSMUST00000177847 889 ntBASIC10.41□□□□□ -0.74
TgfaP48030 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC10.41□□□□□ -0.74
TgfaP48030 Gm12407-201ENSMUST00000180219 324 ntBASIC10.41□□□□□ -0.74
TgfaP48030 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
TgfaP48030 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC10.41□□□□□ -0.74
TgfaP48030 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC10.41□□□□□ -0.74
TgfaP48030 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC10.41□□□□□ -0.74
TgfaP48030 AC166344.1-201ENSMUST00000223745 674 ntBASIC10.41□□□□□ -0.74
TgfaP48030 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
TgfaP48030 AC136376.2-201ENSMUST00000228819 490 ntBASIC10.41□□□□□ -0.74
TgfaP48030 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
TgfaP48030 Gm25201-201ENSMUST00000083093 170 ntBASIC10.41□□□□□ -0.74
TgfaP48030 Gm23680-201ENSMUST00000083162 164 ntBASIC10.41□□□□□ -0.74
TgfaP48030 Mir483-201ENSMUST00000093631 73 ntBASIC10.41□□□□□ -0.74
TgfaP48030 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
TgfaP48030 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
TgfaP48030 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
TgfaP48030 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
TgfaP48030 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC10.41□□□□□ -0.74
TgfaP48030 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
TgfaP48030 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
TgfaP48030 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
TgfaP48030 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
TgfaP48030 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC10.41□□□□□ -0.74
TgfaP48030 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
TgfaP48030 Gm45643-201ENSMUST00000211364 1484 ntBASIC10.41□□□□□ -0.74
TgfaP48030 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
TgfaP48030 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
TgfaP48030 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC10.41□□□□□ -0.74
TgfaP48030 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
TgfaP48030 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
TgfaP48030 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
TgfaP48030 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
TgfaP48030 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
TgfaP48030 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
TgfaP48030 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
TgfaP48030 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
TgfaP48030 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
TgfaP48030 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
TgfaP48030 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
TgfaP48030 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
TgfaP48030 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
TgfaP48030 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
TgfaP48030 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
TgfaP48030 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
TgfaP48030 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
TgfaP48030 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
TgfaP48030 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
TgfaP48030 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
TgfaP48030 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
TgfaP48030 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.4□□□□□ -0.74
TgfaP48030 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
TgfaP48030 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
TgfaP48030 Gm12969-201ENSMUST00000120199 1004 ntBASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms