Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gli1P47806 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Gli1P47806 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.72□□□□□ -0.53
Gli1P47806 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gli1P47806 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Gli1P47806 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Gli1P47806 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Gli1P47806 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Gli1P47806 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.71□□□□□ -0.53
Gli1P47806 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Gli1P47806 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gli1P47806 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Gli1P47806 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Gli1P47806 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gli1P47806 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gli1P47806 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Gli1P47806 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gli1P47806 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gli1P47806 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Gli1P47806 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.71□□□□□ -0.53
Gli1P47806 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gli1P47806 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.71□□□□□ -0.53
Gli1P47806 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gli1P47806 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gli1P47806 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.71□□□□□ -0.53
Gli1P47806 Gm12502-201ENSMUST00000120197 444 ntBASIC11.71□□□□□ -0.53
Gli1P47806 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Gli1P47806 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Gli1P47806 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gli1P47806 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Gli1P47806 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.71□□□□□ -0.53
Gli1P47806 Mir6979-201ENSMUST00000183927 56 ntBASIC11.71□□□□□ -0.53
Gli1P47806 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.71□□□□□ -0.53
Gli1P47806 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Gli1P47806 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Gli1P47806 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Gli1P47806 Gm30285-201ENSMUST00000214614 422 ntBASIC11.71□□□□□ -0.53
Gli1P47806 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Gli1P47806 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.71□□□□□ -0.53
Gli1P47806 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.71□□□□□ -0.53
Gli1P47806 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gli1P47806 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gli1P47806 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.71□□□□□ -0.53
Gli1P47806 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.71□□□□□ -0.54
Gli1P47806 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Gli1P47806 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Gli1P47806 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Gli1P47806 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.71□□□□□ -0.54
Gli1P47806 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Gli1P47806 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Gli1P47806 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Gli1P47806 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.71□□□□□ -0.54
Gli1P47806 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Gli1P47806 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Gli1P47806 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Gli1P47806 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Gli1P47806 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.7□□□□□ -0.54
Gli1P47806 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gli1P47806 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gli1P47806 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gli1P47806 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.7□□□□□ -0.54
Gli1P47806 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gli1P47806 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gli1P47806 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gli1P47806 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Gli1P47806 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gli1P47806 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Gli1P47806 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Gli1P47806 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gli1P47806 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gli1P47806 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gli1P47806 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gli1P47806 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Gli1P47806 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Gli1P47806 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Gli1P47806 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gli1P47806 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.7□□□□□ -0.54
Gli1P47806 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Gli1P47806 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Gli1P47806 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.7□□□□□ -0.54
Gli1P47806 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.7□□□□□ -0.54
Gli1P47806 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gli1P47806 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gli1P47806 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gli1P47806 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Gli1P47806 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Gli1P47806 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Gli1P47806 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gli1P47806 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gli1P47806 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Gli1P47806 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gli1P47806 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gli1P47806 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gli1P47806 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Gli1P47806 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Gli1P47806 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gli1P47806 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gli1P47806 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Gli1P47806 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Gli1P47806 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms