Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Vps4bP46467 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps4bP46467 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps4bP46467 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vps4bP46467 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps4bP46467 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.16□□□□□ -0.46
Vps4bP46467 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.16□□□□□ -0.46
Vps4bP46467 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.16□□□□□ -0.46
Vps4bP46467 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Vps4bP46467 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps4bP46467 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vps4bP46467 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps4bP46467 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.16□□□□□ -0.46
Vps4bP46467 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps4bP46467 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps4bP46467 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps4bP46467 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps4bP46467 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps4bP46467 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.16□□□□□ -0.46
Vps4bP46467 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vps4bP46467 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Vps4bP46467 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps4bP46467 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vps4bP46467 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.16□□□□□ -0.46
Vps4bP46467 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vps4bP46467 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.16□□□□□ -0.46
Vps4bP46467 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.16□□□□□ -0.46
Vps4bP46467 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.16□□□□□ -0.46
Vps4bP46467 Gm38158-201ENSMUST00000194617 339 ntBASIC12.16□□□□□ -0.46
Vps4bP46467 Gm43758-201ENSMUST00000199500 367 ntBASIC12.16□□□□□ -0.46
Vps4bP46467 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.16□□□□□ -0.46
Vps4bP46467 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vps4bP46467 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.16□□□□□ -0.46
Vps4bP46467 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps4bP46467 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.16□□□□□ -0.46
Vps4bP46467 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps4bP46467 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps4bP46467 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vps4bP46467 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vps4bP46467 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps4bP46467 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps4bP46467 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vps4bP46467 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vps4bP46467 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vps4bP46467 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps4bP46467 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps4bP46467 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vps4bP46467 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.15□□□□□ -0.46
Vps4bP46467 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps4bP46467 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps4bP46467 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps4bP46467 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps4bP46467 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps4bP46467 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps4bP46467 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps4bP46467 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Vps4bP46467 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Vps4bP46467 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.15□□□□□ -0.46
Vps4bP46467 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.15□□□□□ -0.46
Vps4bP46467 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.15□□□□□ -0.46
Vps4bP46467 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vps4bP46467 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.15□□□□□ -0.46
Vps4bP46467 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps4bP46467 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Vps4bP46467 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Vps4bP46467 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Vps4bP46467 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Vps4bP46467 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.15□□□□□ -0.46
Vps4bP46467 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.15□□□□□ -0.46
Vps4bP46467 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.15□□□□□ -0.46
Vps4bP46467 Gm5950-201ENSMUST00000213337 772 ntBASIC12.15□□□□□ -0.46
Vps4bP46467 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vps4bP46467 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps4bP46467 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps4bP46467 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.15□□□□□ -0.46
Vps4bP46467 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vps4bP46467 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps4bP46467 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps4bP46467 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Vps4bP46467 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Vps4bP46467 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps4bP46467 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps4bP46467 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.14□□□□□ -0.47
Vps4bP46467 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps4bP46467 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps4bP46467 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vps4bP46467 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.14□□□□□ -0.47
Vps4bP46467 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.14□□□□□ -0.47
Vps4bP46467 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps4bP46467 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps4bP46467 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps4bP46467 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps4bP46467 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.14□□□□□ -0.47
Vps4bP46467 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.14□□□□□ -0.47
Vps4bP46467 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vps4bP46467 Gm24845-201ENSMUST00000158034 109 ntBASIC12.14□□□□□ -0.47
Vps4bP46467 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.14□□□□□ -0.47
Vps4bP46467 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps4bP46467 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.14□□□□□ -0.47
Vps4bP46467 Gm43118-201ENSMUST00000199149 775 ntBASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms