Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msh2P43247 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msh2P43247 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.34□□□□□ -0.43
Msh2P43247 Gm12058-201ENSMUST00000118614 437 ntBASIC12.34□□□□□ -0.43
Msh2P43247 Gm13315-201ENSMUST00000120376 991 ntBASIC12.34□□□□□ -0.43
Msh2P43247 Gm11597-201ENSMUST00000121423 964 ntBASIC12.34□□□□□ -0.43
Msh2P43247 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.34□□□□□ -0.43
Msh2P43247 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msh2P43247 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
Msh2P43247 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.34□□□□□ -0.43
Msh2P43247 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.34□□□□□ -0.43
Msh2P43247 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.34□□□□□ -0.43
Msh2P43247 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.34□□□□□ -0.43
Msh2P43247 Gm38266-201ENSMUST00000194931 421 ntBASIC12.34□□□□□ -0.43
Msh2P43247 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Msh2P43247 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Msh2P43247 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msh2P43247 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Msh2P43247 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Msh2P43247 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msh2P43247 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Msh2P43247 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msh2P43247 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Msh2P43247 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.34□□□□□ -0.43
Msh2P43247 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msh2P43247 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Msh2P43247 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.34□□□□□ -0.43
Msh2P43247 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Msh2P43247 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msh2P43247 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Msh2P43247 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msh2P43247 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.34□□□□□ -0.43
Msh2P43247 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Msh2P43247 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msh2P43247 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.34□□□□□ -0.43
Msh2P43247 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msh2P43247 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Msh2P43247 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.33□□□□□ -0.43
Msh2P43247 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Msh2P43247 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Msh2P43247 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.33□□□□□ -0.44
Msh2P43247 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msh2P43247 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msh2P43247 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msh2P43247 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Msh2P43247 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.33□□□□□ -0.44
Msh2P43247 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.33□□□□□ -0.44
Msh2P43247 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msh2P43247 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Msh2P43247 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Msh2P43247 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Msh2P43247 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Msh2P43247 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Msh2P43247 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Msh2P43247 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Msh2P43247 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msh2P43247 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.33□□□□□ -0.44
Msh2P43247 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Msh2P43247 Gm13342-201ENSMUST00000121055 207 ntBASIC12.33□□□□□ -0.44
Msh2P43247 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.33□□□□□ -0.44
Msh2P43247 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.33□□□□□ -0.44
Msh2P43247 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.33□□□□□ -0.44
Msh2P43247 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.33□□□□□ -0.44
Msh2P43247 Gm43179-201ENSMUST00000198797 275 ntBASIC12.33□□□□□ -0.44
Msh2P43247 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.33□□□□□ -0.44
Msh2P43247 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.33□□□□□ -0.44
Msh2P43247 Gm6334-201ENSMUST00000207083 228 ntBASIC12.33□□□□□ -0.44
Msh2P43247 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Msh2P43247 Gm6007-201ENSMUST00000208170 823 ntBASIC12.33□□□□□ -0.44
Msh2P43247 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msh2P43247 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msh2P43247 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Msh2P43247 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msh2P43247 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msh2P43247 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.33□□□□□ -0.44
Msh2P43247 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msh2P43247 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msh2P43247 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msh2P43247 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msh2P43247 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Msh2P43247 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msh2P43247 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msh2P43247 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msh2P43247 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msh2P43247 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Msh2P43247 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msh2P43247 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.33□□□□□ -0.44
Msh2P43247 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.33□□□□□ -0.44
Msh2P43247 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msh2P43247 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msh2P43247 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.32□□□□□ -0.44
Msh2P43247 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.32□□□□□ -0.44
Msh2P43247 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Msh2P43247 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Msh2P43247 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Msh2P43247 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Msh2P43247 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Msh2P43247 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Msh2P43247 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Msh2P43247 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms