Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HttP42859 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.33□□□□□ -0.44
HttP42859 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HttP42859 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HttP42859 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HttP42859 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
HttP42859 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HttP42859 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
HttP42859 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HttP42859 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
HttP42859 Gm19918-201ENSMUST00000194858 400 ntBASIC12.33□□□□□ -0.44
HttP42859 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
HttP42859 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HttP42859 Prmt1-214ENSMUST00000209124 741 ntTSL 5 BASIC12.33□□□□□ -0.44
HttP42859 AC154347.2-201ENSMUST00000221223 715 ntTSL 3 BASIC12.33□□□□□ -0.44
HttP42859 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HttP42859 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
HttP42859 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.33□□□□□ -0.44
HttP42859 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HttP42859 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HttP42859 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
HttP42859 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
HttP42859 Wfdc2-203ENSMUST00000109345 558 ntAPPRIS ALT2 TSL 3 BASIC12.33□□□□□ -0.44
HttP42859 Gm15636-201ENSMUST00000119205 668 ntBASIC12.33□□□□□ -0.44
HttP42859 Gm8302-201ENSMUST00000119217 852 ntBASIC12.33□□□□□ -0.44
HttP42859 Gm14633-201ENSMUST00000121152 470 ntBASIC12.33□□□□□ -0.44
HttP42859 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HttP42859 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HttP42859 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HttP42859 Gm8618-201ENSMUST00000097570 432 ntBASIC12.33□□□□□ -0.44
HttP42859 Larp1b-204ENSMUST00000099121 1030 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HttP42859 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
HttP42859 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HttP42859 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
HttP42859 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.32□□□□□ -0.44
HttP42859 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
HttP42859 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HttP42859 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HttP42859 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
HttP42859 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
HttP42859 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC12.32□□□□□ -0.44
HttP42859 Gm15699-201ENSMUST00000159213 280 ntTSL 5 BASIC12.32□□□□□ -0.44
HttP42859 Gm16227-201ENSMUST00000160088 563 ntTSL 3 BASIC12.32□□□□□ -0.44
HttP42859 Gm5808-201ENSMUST00000178090 357 ntBASIC12.32□□□□□ -0.44
HttP42859 CT571271.1-201ENSMUST00000227071 670 ntBASIC12.32□□□□□ -0.44
HttP42859 Gm25580-201ENSMUST00000083409 327 ntBASIC12.32□□□□□ -0.44
HttP42859 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
HttP42859 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC12.32□□□□□ -0.44
HttP42859 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
HttP42859 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HttP42859 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HttP42859 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.32□□□□□ -0.44
HttP42859 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HttP42859 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HttP42859 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
HttP42859 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HttP42859 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HttP42859 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC12.32□□□□□ -0.44
HttP42859 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
HttP42859 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HttP42859 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
HttP42859 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC12.32□□□□□ -0.44
HttP42859 Mir3091-201ENSMUST00000175086 76 ntBASIC12.32□□□□□ -0.44
HttP42859 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HttP42859 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.32□□□□□ -0.44
HttP42859 Gm42908-201ENSMUST00000197508 870 ntBASIC12.32□□□□□ -0.44
HttP42859 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HttP42859 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC12.32□□□□□ -0.44
HttP42859 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC12.32□□□□□ -0.44
HttP42859 Gm18621-201ENSMUST00000222677 679 ntBASIC12.32□□□□□ -0.44
HttP42859 Rpl37-201ENSMUST00000045356 835 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HttP42859 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HttP42859 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HttP42859 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HttP42859 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
HttP42859 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.32□□□□□ -0.44
HttP42859 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
HttP42859 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HttP42859 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HttP42859 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
HttP42859 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HttP42859 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HttP42859 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
HttP42859 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HttP42859 Ifna5-201ENSMUST00000102804 570 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
HttP42859 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.31□□□□□ -0.44
HttP42859 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC12.31□□□□□ -0.44
HttP42859 Rassf6-205ENSMUST00000202704 1178 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
HttP42859 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC12.31□□□□□ -0.44
HttP42859 CT009550.1-201ENSMUST00000225750 864 ntBASIC12.31□□□□□ -0.44
HttP42859 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
HttP42859 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
HttP42859 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
HttP42859 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HttP42859 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.31□□□□□ -0.44
HttP42859 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
HttP42859 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
HttP42859 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
HttP42859 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
HttP42859 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms