Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.26□□□□□ -0.61
Sox6P40645 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox6P40645 Gm8018-201ENSMUST00000173536 789 ntBASIC11.26□□□□□ -0.61
Sox6P40645 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
Sox6P40645 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox6P40645 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Sox6P40645 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox6P40645 Gm43630-201ENSMUST00000201550 776 ntBASIC11.26□□□□□ -0.61
Sox6P40645 Gm44974-201ENSMUST00000206387 1279 ntBASIC11.26□□□□□ -0.61
Sox6P40645 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sox6P40645 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sox6P40645 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.26□□□□□ -0.61
Sox6P40645 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.26□□□□□ -0.61
Sox6P40645 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox6P40645 Gm9823-201ENSMUST00000051212 327 ntBASIC11.26□□□□□ -0.61
Sox6P40645 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox6P40645 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sox6P40645 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox6P40645 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox6P40645 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox6P40645 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Sox6P40645 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sox6P40645 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox6P40645 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox6P40645 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox6P40645 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Sox6P40645 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.26□□□□□ -0.61
Sox6P40645 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox6P40645 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.26□□□□□ -0.61
Sox6P40645 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox6P40645 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.26□□□□□ -0.61
Sox6P40645 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Sox6P40645 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC11.26□□□□□ -0.61
Sox6P40645 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox6P40645 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sox6P40645 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.25□□□□□ -0.61
Sox6P40645 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox6P40645 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox6P40645 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sox6P40645 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox6P40645 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox6P40645 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Sox6P40645 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.25□□□□□ -0.61
Sox6P40645 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox6P40645 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox6P40645 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox6P40645 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox6P40645 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox6P40645 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sox6P40645 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox6P40645 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sox6P40645 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox6P40645 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sox6P40645 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Sox6P40645 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox6P40645 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.25□□□□□ -0.61
Sox6P40645 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox6P40645 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.25□□□□□ -0.61
Sox6P40645 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Sox6P40645 Mir1938-201ENSMUST00000158746 100 ntBASIC11.25□□□□□ -0.61
Sox6P40645 Gm29396-201ENSMUST00000185659 716 ntBASIC11.25□□□□□ -0.61
Sox6P40645 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.25□□□□□ -0.61
Sox6P40645 Gm37489-201ENSMUST00000191883 159 ntBASIC11.25□□□□□ -0.61
Sox6P40645 Gm43118-201ENSMUST00000199149 775 ntBASIC11.25□□□□□ -0.61
Sox6P40645 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.25□□□□□ -0.61
Sox6P40645 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Sox6P40645 Gm10608-202ENSMUST00000213924 676 ntBASIC11.25□□□□□ -0.61
Sox6P40645 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.25□□□□□ -0.61
Sox6P40645 Gm7399-201ENSMUST00000032395 858 ntBASIC11.25□□□□□ -0.61
Sox6P40645 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox6P40645 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.25□□□□□ -0.61
Sox6P40645 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox6P40645 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.25□□□□□ -0.61
Sox6P40645 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox6P40645 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Sox6P40645 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sox6P40645 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sox6P40645 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox6P40645 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox6P40645 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox6P40645 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox6P40645 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox6P40645 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Sox6P40645 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox6P40645 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox6P40645 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox6P40645 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sox6P40645 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.25□□□□□ -0.61
Sox6P40645 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Sox6P40645 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox6P40645 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.25□□□□□ -0.61
Sox6P40645 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox6P40645 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Sox6P40645 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sox6P40645 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.24□□□□□ -0.61
Sox6P40645 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox6P40645 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox6P40645 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox6P40645 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox6P40645 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms