Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cd9P40240 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cd9P40240 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cd9P40240 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cd9P40240 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cd9P40240 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cd9P40240 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cd9P40240 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cd9P40240 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cd9P40240 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cd9P40240 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Cd9P40240 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cd9P40240 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cd9P40240 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.8□□□□□ -0.52
Cd9P40240 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cd9P40240 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.8□□□□□ -0.52
Cd9P40240 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cd9P40240 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cd9P40240 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Cd9P40240 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cd9P40240 Gm37666-201ENSMUST00000194110 866 ntBASIC11.8□□□□□ -0.52
Cd9P40240 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.8□□□□□ -0.52
Cd9P40240 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cd9P40240 Gm43002-201ENSMUST00000200310 155 ntBASIC11.8□□□□□ -0.52
Cd9P40240 Gm6450-201ENSMUST00000200896 574 ntBASIC11.8□□□□□ -0.52
Cd9P40240 Gm17812-201ENSMUST00000204935 318 ntBASIC11.8□□□□□ -0.52
Cd9P40240 Gm17827-201ENSMUST00000211825 742 ntBASIC11.8□□□□□ -0.52
Cd9P40240 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.8□□□□□ -0.52
Cd9P40240 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.8□□□□□ -0.52
Cd9P40240 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Cd9P40240 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cd9P40240 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Cd9P40240 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Cd9P40240 Gm8420-201ENSMUST00000097103 598 ntBASIC11.8□□□□□ -0.52
Cd9P40240 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cd9P40240 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cd9P40240 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cd9P40240 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cd9P40240 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cd9P40240 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cd9P40240 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cd9P40240 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Cd9P40240 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cd9P40240 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cd9P40240 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.79□□□□□ -0.52
Cd9P40240 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cd9P40240 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cd9P40240 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cd9P40240 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cd9P40240 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cd9P40240 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cd9P40240 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cd9P40240 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Cd9P40240 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Cd9P40240 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Cd9P40240 Gm13350-201ENSMUST00000120519 479 ntBASIC11.79□□□□□ -0.52
Cd9P40240 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.79□□□□□ -0.52
Cd9P40240 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cd9P40240 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cd9P40240 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cd9P40240 Gm8913-201ENSMUST00000209491 641 ntBASIC11.79□□□□□ -0.52
Cd9P40240 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cd9P40240 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cd9P40240 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.79□□□□□ -0.52
Cd9P40240 Gm270-201ENSMUST00000223010 976 ntBASIC11.79□□□□□ -0.52
Cd9P40240 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.79□□□□□ -0.52
Cd9P40240 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cd9P40240 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cd9P40240 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cd9P40240 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Cd9P40240 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cd9P40240 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cd9P40240 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cd9P40240 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Cd9P40240 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.79□□□□□ -0.52
Cd9P40240 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Cd9P40240 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cd9P40240 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cd9P40240 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cd9P40240 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cd9P40240 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cd9P40240 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cd9P40240 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Cd9P40240 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cd9P40240 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cd9P40240 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.78□□□□□ -0.52
Cd9P40240 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cd9P40240 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cd9P40240 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cd9P40240 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cd9P40240 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cd9P40240 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cd9P40240 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.78□□□□□ -0.52
Cd9P40240 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cd9P40240 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cd9P40240 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Cd9P40240 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Cd9P40240 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.78□□□□□ -0.52
Cd9P40240 Gm7584-201ENSMUST00000175829 940 ntBASIC11.78□□□□□ -0.52
Cd9P40240 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms