Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Traf1P39428 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Traf1P39428 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Traf1P39428 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.88□□□□□ -0.19
Traf1P39428 AC154404.1-201ENSMUST00000223601 2077 ntBASIC13.88□□□□□ -0.19
Traf1P39428 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Traf1P39428 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC13.88□□□□□ -0.19
Traf1P39428 Gm5419-201ENSMUST00000119301 527 ntBASIC13.88□□□□□ -0.19
Traf1P39428 Gm13408-201ENSMUST00000119822 798 ntBASIC13.88□□□□□ -0.19
Traf1P39428 Gm12164-201ENSMUST00000121695 551 ntBASIC13.88□□□□□ -0.19
Traf1P39428 Gm13935-201ENSMUST00000121859 798 ntBASIC13.88□□□□□ -0.19
Traf1P39428 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.88□□□□□ -0.19
Traf1P39428 Gm9550-201ENSMUST00000161130 862 ntBASIC13.88□□□□□ -0.19
Traf1P39428 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Traf1P39428 Gm9211-201ENSMUST00000182882 975 ntBASIC13.88□□□□□ -0.19
Traf1P39428 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC13.88□□□□□ -0.19
Traf1P39428 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC13.88□□□□□ -0.19
Traf1P39428 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC13.88□□□□□ -0.19
Traf1P39428 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC13.88□□□□□ -0.19
Traf1P39428 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Traf1P39428 Gm10288-201ENSMUST00000084614 537 ntBASIC13.88□□□□□ -0.19
Traf1P39428 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Traf1P39428 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC13.88□□□□□ -0.19
Traf1P39428 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Traf1P39428 Gm43365-201ENSMUST00000196522 2106 ntBASIC13.88□□□□□ -0.19
Traf1P39428 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Traf1P39428 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Traf1P39428 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Traf1P39428 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Traf1P39428 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Traf1P39428 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Traf1P39428 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.88□□□□□ -0.19
Traf1P39428 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Traf1P39428 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Traf1P39428 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Traf1P39428 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Traf1P39428 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Traf1P39428 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Traf1P39428 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Traf1P39428 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Traf1P39428 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Traf1P39428 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Traf1P39428 Map1b-203ENSMUST00000223725 2669 ntBASIC13.87□□□□□ -0.19
Traf1P39428 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Traf1P39428 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Traf1P39428 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Traf1P39428 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Traf1P39428 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Traf1P39428 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Traf1P39428 Gm13045-201ENSMUST00000119019 712 ntBASIC13.87□□□□□ -0.19
Traf1P39428 Gm8566-201ENSMUST00000120174 465 ntBASIC13.87□□□□□ -0.19
Traf1P39428 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Traf1P39428 Gm23699-201ENSMUST00000158835 135 ntBASIC13.87□□□□□ -0.19
Traf1P39428 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC13.87□□□□□ -0.19
Traf1P39428 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Traf1P39428 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Traf1P39428 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Traf1P39428 Gm5706-201ENSMUST00000181525 993 ntBASIC13.87□□□□□ -0.19
Traf1P39428 Gm5733-201ENSMUST00000190232 939 ntBASIC13.87□□□□□ -0.19
Traf1P39428 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC13.87□□□□□ -0.19
Traf1P39428 Gm2553-201ENSMUST00000215986 605 ntBASIC13.87□□□□□ -0.19
Traf1P39428 Gm1821-202ENSMUST00000227415 750 ntBASIC13.87□□□□□ -0.19
Traf1P39428 AC121960.1-201ENSMUST00000227982 564 ntBASIC13.87□□□□□ -0.19
Traf1P39428 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Traf1P39428 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Traf1P39428 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Traf1P39428 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Traf1P39428 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Traf1P39428 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Traf1P39428 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Traf1P39428 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Traf1P39428 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Traf1P39428 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Traf1P39428 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Traf1P39428 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Traf1P39428 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.87□□□□□ -0.19
Traf1P39428 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Traf1P39428 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Traf1P39428 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Traf1P39428 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Traf1P39428 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Traf1P39428 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Traf1P39428 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.86□□□□□ -0.19
Traf1P39428 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Traf1P39428 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Traf1P39428 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Traf1P39428 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Traf1P39428 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Traf1P39428 Gm5053-201ENSMUST00000208361 1678 ntBASIC13.86□□□□□ -0.19
Traf1P39428 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Traf1P39428 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Traf1P39428 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC13.86□□□□□ -0.19
Traf1P39428 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Traf1P39428 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Traf1P39428 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Traf1P39428 Mir680-2-201ENSMUST00000102163 110 ntBASIC13.86□□□□□ -0.19
Traf1P39428 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC13.86□□□□□ -0.19
Traf1P39428 Gm23251-201ENSMUST00000103773 110 ntBASIC13.86□□□□□ -0.19
Traf1P39428 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Traf1P39428 Gm12165-201ENSMUST00000117047 342 ntBASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms