Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.5□□□□□ -0.57
Cdh4P39038 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.5□□□□□ -0.57
Cdh4P39038 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh4P39038 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh4P39038 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh4P39038 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh4P39038 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh4P39038 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh4P39038 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.5□□□□□ -0.57
Cdh4P39038 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh4P39038 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.5□□□□□ -0.57
Cdh4P39038 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
Cdh4P39038 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Cdh4P39038 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.5□□□□□ -0.57
Cdh4P39038 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Cdh4P39038 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh4P39038 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.49□□□□□ -0.57
Cdh4P39038 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh4P39038 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh4P39038 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Cdh4P39038 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh4P39038 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh4P39038 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh4P39038 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh4P39038 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh4P39038 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh4P39038 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh4P39038 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh4P39038 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.49□□□□□ -0.57
Cdh4P39038 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh4P39038 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.49□□□□□ -0.57
Cdh4P39038 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Cdh4P39038 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.49□□□□□ -0.57
Cdh4P39038 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh4P39038 Gm2260-201ENSMUST00000184965 657 ntBASIC11.49□□□□□ -0.57
Cdh4P39038 Gm29199-201ENSMUST00000187766 775 ntBASIC11.49□□□□□ -0.57
Cdh4P39038 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.49□□□□□ -0.57
Cdh4P39038 AY036118-201ENSMUST00000200021 923 ntBASIC11.49□□□□□ -0.57
Cdh4P39038 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh4P39038 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh4P39038 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh4P39038 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh4P39038 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh4P39038 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh4P39038 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.49□□□□□ -0.57
Cdh4P39038 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh4P39038 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Cdh4P39038 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh4P39038 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh4P39038 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh4P39038 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh4P39038 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh4P39038 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.48□□□□□ -0.57
Cdh4P39038 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh4P39038 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh4P39038 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh4P39038 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh4P39038 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh4P39038 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh4P39038 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Cdh4P39038 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Cdh4P39038 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh4P39038 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh4P39038 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh4P39038 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Cdh4P39038 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh4P39038 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Cdh4P39038 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh4P39038 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh4P39038 Gm22133-201ENSMUST00000102082 109 ntBASIC11.48□□□□□ -0.57
Cdh4P39038 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh4P39038 Gm11511-201ENSMUST00000118146 540 ntBASIC11.48□□□□□ -0.57
Cdh4P39038 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.48□□□□□ -0.57
Cdh4P39038 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Cdh4P39038 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh4P39038 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Cdh4P39038 Gm42599-201ENSMUST00000201308 469 ntBASIC11.48□□□□□ -0.57
Cdh4P39038 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC11.48□□□□□ -0.57
Cdh4P39038 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.48□□□□□ -0.57
Cdh4P39038 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh4P39038 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh4P39038 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh4P39038 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Cdh4P39038 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.48□□□□□ -0.57
Cdh4P39038 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh4P39038 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh4P39038 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Cdh4P39038 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh4P39038 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh4P39038 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh4P39038 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh4P39038 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh4P39038 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Cdh4P39038 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh4P39038 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh4P39038 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh4P39038 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh4P39038 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh4P39038 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh4P39038 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms